RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 HAND2P61296 217 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 PPP2R5BQ15173 497 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 AKNAD1Q5T1N1 836 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 TMEM63BQ5T3F8 832 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 SLC30A10Q6XR72 485 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 RNF207Q6ZRF8 634 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 DEFB128Q7Z7B8 93 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 KCNV2Q8TDN2 545 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 TMEM47Q9BQJ4 181 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 WNT8AQ9H1J5 351 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 TRMT13Q9NUP7 481 aaKnown RBP10.37□□□□□ -0.75
TDP1-208ENST00000553989 ANAPC4Q9UJX5 808 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 PNMA2Q9UL42 364 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 NOD1Q9Y239 953 aa10.37□□□□□ -0.75
TDP1-208ENST00000553989 YBX2Q9Y2T7 364 aaKnown RBP10.37□□□□□ -0.75
TDP1-208ENST00000553989 TNKSO95271 1327 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 A0A0D9SFI3 127 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 B4DLN1 442 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 ACTN1P12814 892 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 ATP2A2P16615 1042 aaKnown RBP10.36□□□□□ -0.75
TDP1-208ENST00000553989 MRPL12P52815 198 aaKnown RBP10.36□□□□□ -0.75
TDP1-208ENST00000553989 SKIV2LQ15477 1246 aaKnown RBP10.36□□□□□ -0.75
TDP1-208ENST00000553989 USH1GQ495M9 461 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 MCMDC2Q4G0Z9 681 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 MFSD6Q6ZSS7 791 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 MORC4Q8TE76 937 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 ATXN2LQ8WWM7 1075 aaKnown RBP10.36□□□□□ -0.75
TDP1-208ENST00000553989 RILPL2Q969X0 211 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 FAM227BQ96M60 508 aa10.36□□□□□ -0.75
TDP1-208ENST00000553989 MTG1Q9BT17 334 aaPredicted RBP10.36□□□□□ -0.75
TDP1-208ENST00000553989 LOC102724159A0A0B4J2E5 919 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 NKRFO15226 690 aaKnown RBP eCLIP10.35□□□□□ -0.75
TDP1-208ENST00000553989 FGAP02671 866 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 PFKMP08237 780 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 PDHBP11177 359 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 MYOGP15173 224 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 PDE1AP54750 535 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 RPS6P62753 249 aaKnown RBP10.35□□□□□ -0.75
TDP1-208ENST00000553989 MRPS5P82675 430 aaKnown RBP10.35□□□□□ -0.75
TDP1-208ENST00000553989 PURAQ00577 322 aaKnown RBP10.35□□□□□ -0.75
TDP1-208ENST00000553989 ADGRE1Q14246 886 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 PWP2Q15269 919 aaKnown RBP10.35□□□□□ -0.75
TDP1-208ENST00000553989 ALX1Q15699 326 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 BTNL9Q6UXG8 535 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 RETREG2Q8NC44 543 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 SCFD2Q8WU76 684 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 PPP1R13LQ8WUF5 828 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 ASB2Q96Q27 587 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 FTOQ9C0B1 505 aaKnown RBP eCLIP10.35□□□□□ -0.75
TDP1-208ENST00000553989 DAXXQ9UER7 740 aaPredicted RBP10.35□□□□□ -0.75
TDP1-208ENST00000553989 PCDHA11Q9Y5I1 949 aa10.35□□□□□ -0.75
TDP1-208ENST00000553989 CCDC171Q6TFL3 1326 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 SALL3Q9BXA9 1300 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 DHX16O60231 1041 aaKnown RBP10.34□□□□□ -0.75
TDP1-208ENST00000553989 TXNP10599 105 aaKnown RBP10.34□□□□□ -0.75
TDP1-208ENST00000553989 HSPD1P10809 573 aaKnown RBP10.34□□□□□ -0.75
TDP1-208ENST00000553989 NOVP48745 357 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 ZNF543Q08ER8 600 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 NMIQ13287 307 aaPredicted RBP10.34□□□□□ -0.75
TDP1-208ENST00000553989 TTLL4Q14679 1199 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 NBPF20Q3BBV1 942 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 TMEM67Q5HYA8 995 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 ZNF589Q86UQ0 364 aaPredicted RBP10.34□□□□□ -0.75
TDP1-208ENST00000553989 ADAMTS19Q8TE59 1207 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 CLEC4DQ8WXI8 215 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 ESR2Q92731 530 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 COPS5Q92905 334 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 ZKSCAN3Q9BRR0 538 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 RNF41Q9H4P4 317 aaPredicted RBP10.34□□□□□ -0.75
TDP1-208ENST00000553989 CERS4Q9HA82 394 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 TCP11L1Q9NUJ3 509 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 VCANP13611 3396 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 LCTP09848 1927 aa10.34□□□□□ -0.75
TDP1-208ENST00000553989 WDR19Q8NEZ3 1342 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 PRUNE2Q8WUY3 3088 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 KPNA6O60684 536 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 CA3P07451 260 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 FGRP09769 529 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 GOLGA8HP0CJ92 632 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 PCP11498 1178 aaKnown RBP10.33□□□□□ -0.76
TDP1-208ENST00000553989 RFC2P35250 354 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 MFAP1P55081 439 aaKnown RBP10.33□□□□□ -0.76
TDP1-208ENST00000553989 BFSP2Q13515 415 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 GPATCH4Q5T3I0 446 aaKnown RBP10.33□□□□□ -0.76
TDP1-208ENST00000553989 NFRKBQ6P4R8 1299 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 TBC1D10CQ8IV04 446 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 DNERQ8NFT8 737 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 TTC14Q96N46 770 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 SLC9A7Q96T83 725 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 UHRF1Q96T88 793 aaPredicted RBP10.33□□□□□ -0.76
TDP1-208ENST00000553989 LNPKQ9C0E8 428 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 GBF1Q92538 1859 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 MYO9BQ13459 2157 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 ZMYM6O95789 1325 aa10.33□□□□□ -0.76
TDP1-208ENST00000553989 RBM47A0AV96 593 aaKnown RBP10.32□□□□□ -0.76
TDP1-208ENST00000553989 KIF28PB7ZC32 967 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 ZNF213O14771 459 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 KCNJ6P48051 423 aa10.32□□□□□ -0.76
TDP1-208ENST00000553989 FXR2P51116 673 aaKnown RBP eCLIP10.32□□□□□ -0.76
TDP1-208ENST00000553989 CDC37Q16543 378 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms