RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 COPS5Q92905 334 aa18.47■□□□□ 0.55
TUBB3-203ENST00000553967 KRT23Q9C075 422 aa18.47■□□□□ 0.55
TUBB3-203ENST00000553967 MAF1Q9H063 256 aa18.47■□□□□ 0.55
TUBB3-203ENST00000553967 TNKSO95271 1327 aa18.47■□□□□ 0.55
TUBB3-203ENST00000553967 ABCB11O95342 1321 aa18.47■□□□□ 0.55
TUBB3-203ENST00000553967 A6NJR5 290 aa18.46■□□□□ 0.55
TUBB3-203ENST00000553967 KPNA6O60684 536 aa18.46■□□□□ 0.55
TUBB3-203ENST00000553967 PARP1P09874 1014 aaKnown RBP18.46■□□□□ 0.55
TUBB3-203ENST00000553967 TXNP10599 105 aaKnown RBP18.46■□□□□ 0.55
TUBB3-203ENST00000553967 CYP2C9P11712 490 aa18.46■□□□□ 0.55
TUBB3-203ENST00000553967 TTLL4Q14679 1199 aa18.46■□□□□ 0.55
TUBB3-203ENST00000553967 RPUSD2Q8IZ73 545 aaKnown RBP18.46■□□□□ 0.55
TUBB3-203ENST00000553967 TBC1D5Q92609 795 aa18.46■□□□□ 0.55
TUBB3-203ENST00000553967 CNNM2Q9H8M5 875 aa18.46■□□□□ 0.55
TUBB3-203ENST00000553967 MSRAQ9UJ68 235 aa18.46■□□□□ 0.55
TUBB3-203ENST00000553967 DHX16O60231 1041 aaKnown RBP18.45■□□□□ 0.54
TUBB3-203ENST00000553967 RAB30Q15771 203 aa18.45■□□□□ 0.54
TUBB3-203ENST00000553967 QRICH1Q2TAL8 776 aa18.45■□□□□ 0.54
TUBB3-203ENST00000553967 NBPF20Q3BBV1 942 aa18.45■□□□□ 0.54
TUBB3-203ENST00000553967 FAM47CQ5HY64 1035 aa18.45■□□□□ 0.54
TUBB3-203ENST00000553967 MCF2L2Q86YR7 1114 aa18.45■□□□□ 0.54
TUBB3-203ENST00000553967 SYTL5Q8TDW5 730 aaPredicted RBP18.45■□□□□ 0.54
TUBB3-203ENST00000553967 SCLYQ96I15 445 aa18.45■□□□□ 0.54
TUBB3-203ENST00000553967 UBAC1Q9BSL1 405 aa18.45■□□□□ 0.54
TUBB3-203ENST00000553967 VAT1LQ9HCJ6 419 aa18.45■□□□□ 0.54
TUBB3-203ENST00000553967 MYO9BQ13459 2157 aa18.45■□□□□ 0.54
TUBB3-203ENST00000553967 CHD9Q3L8U1 2897 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 SCN10AQ9Y5Y9 1956 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 ARIH2O95376 493 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 NFRKBQ6P4R8 1299 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 FBXO11Q86XK2 927 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 NSUN6Q8TEA1 469 aaKnown RBP18.44■□□□□ 0.54
TUBB3-203ENST00000553967 VWCEQ96DN2 955 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 TAAR1Q96RJ0 339 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 IL25Q9H293 177 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 JMJD4Q9H9V9 463 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 COL20A1Q9P218 1284 aa18.44■□□□□ 0.54
TUBB3-203ENST00000553967 MRPL11Q9Y3B7 192 aaKnown RBP18.44■□□□□ 0.54
TUBB3-203ENST00000553967 IFIT1BQ5T764 474 aaKnown RBP18.43■□□□□ 0.54
TUBB3-203ENST00000553967 CCDC62Q6P9F0 684 aa18.43■□□□□ 0.54
TUBB3-203ENST00000553967 SEPT14Q6ZU15 432 aa18.43■□□□□ 0.54
TUBB3-203ENST00000553967 USP38Q8NB14 1042 aa18.43■□□□□ 0.54
TUBB3-203ENST00000553967 PPP1R13LQ8WUF5 828 aa18.43■□□□□ 0.54
TUBB3-203ENST00000553967 IWS1Q96ST2 819 aa18.43■□□□□ 0.54
TUBB3-203ENST00000553967 GAS2L1Q99501 681 aaPredicted RBP18.43■□□□□ 0.54
TUBB3-203ENST00000553967 PRDM12Q9H4Q4 367 aa18.43■□□□□ 0.54
TUBB3-203ENST00000553967 SLC4A7Q9Y6M7 1214 aa18.43■□□□□ 0.54
TUBB3-203ENST00000553967 STXBP2Q15833 593 aa18.42■□□□□ 0.54
TUBB3-203ENST00000553967 RMDN3Q96TC7 470 aa18.42■□□□□ 0.54
TUBB3-203ENST00000553967 NKX2-4Q9H2Z4 354 aa18.42■□□□□ 0.54
TUBB3-203ENST00000553967 YBX2Q9Y2T7 364 aaKnown RBP18.42■□□□□ 0.54
TUBB3-203ENST00000553967 MYH6P13533 1939 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 ZBBXA8MT70 800 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 GH1P01241 217 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 PFKMP08237 780 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 PDE4AP27815 886 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 PTPN11Q06124 597 aaPredicted RBP18.41■□□□□ 0.54
TUBB3-203ENST00000553967 SEC23AQ15436 765 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 LY6KQ17RY6 165 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 TTC22Q5TAA0 569 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 DEFB128Q7Z7B8 93 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 AFG1LQ8WV93 481 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 SLC28A3Q9HAS3 691 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 CHD7Q9P2D1 2997 aa18.41■□□□□ 0.54
TUBB3-203ENST00000553967 KLRF2D3W0D1 207 aa18.4■□□□□ 0.54
TUBB3-203ENST00000553967 GSPT1P15170 499 aaKnown RBP18.4■□□□□ 0.54
TUBB3-203ENST00000553967 RABGGTBP53611 331 aa18.4■□□□□ 0.54
TUBB3-203ENST00000553967 CHMP4BP1P59074 171 aa18.4■□□□□ 0.54
TUBB3-203ENST00000553967 ARHGAP1Q07960 439 aa18.4■□□□□ 0.54
TUBB3-203ENST00000553967 ARHGEF16Q5VV41 709 aa18.4■□□□□ 0.54
TUBB3-203ENST00000553967 CYB5R4Q7L1T6 521 aa18.4■□□□□ 0.54
TUBB3-203ENST00000553967 AMNQ9BXJ7 453 aa18.4■□□□□ 0.54
TUBB3-203ENST00000553967 GBF1Q92538 1859 aa18.39■□□□□ 0.54
TUBB3-203ENST00000553967 PITPNM1O00562 1244 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 CFBP00751 764 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 MMP3P08254 477 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 ATP2A2P16615 1042 aaKnown RBP18.39■□□□□ 0.53
TUBB3-203ENST00000553967 EIF2AK2P19525 551 aaKnown RBP18.39■□□□□ 0.53
TUBB3-203ENST00000553967 RFC2P35250 354 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 CHST3Q7LGC8 479 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 RETREG2Q8NC44 543 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 PXMP2Q9NR77 195 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 MAD2L2Q9UI95 211 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 NOD1Q9Y239 953 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
TUBB3-203ENST00000553967 PCDHA11Q9Y5I1 949 aa18.39■□□□□ 0.53
TUBB3-203ENST00000553967 OPLAHO14841 1288 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 ZBTB5O15062 677 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 EIF3JO75822 258 aaKnown RBP18.38■□□□□ 0.53
TUBB3-203ENST00000553967 NR3C2P08235 984 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 HSD17B4P51659 736 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 TRDNQ13061 729 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 BFSP2Q13515 415 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 ADGRE1Q14246 886 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 PPM1EQ8WY54 764 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 MTMR8Q96EF0 704 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 DDX41Q9UJV9 622 aaKnown RBP18.38■□□□□ 0.53
TUBB3-203ENST00000553967 SCN5AQ14524 2016 aa18.38■□□□□ 0.53
TUBB3-203ENST00000553967 KIAA1217Q5T5P2 1943 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms