RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 EIF2AK2P19525 551 aaKnown RBP26.83■■□□□ 1.89
NEK9-203ENST00000553945 CCT2P78371 535 aaKnown RBP26.83■■□□□ 1.89
NEK9-203ENST00000553945 RNF180Q86T96 592 aa26.83■■□□□ 1.89
NEK9-203ENST00000553945 FCHSD1Q86WN1 690 aa26.83■■□□□ 1.89
NEK9-203ENST00000553945 IWS1Q96ST2 819 aa26.83■■□□□ 1.89
NEK9-203ENST00000553945 PXMP2Q9NR77 195 aa26.83■■□□□ 1.89
NEK9-203ENST00000553945 SYNRGQ9UMZ2 1314 aa26.83■■□□□ 1.89
NEK9-203ENST00000553945 COL6A1P12109 1028 aa26.82■■□□□ 1.88
NEK9-203ENST00000553945 IQSEC1Q6DN90 963 aa26.82■■□□□ 1.88
NEK9-203ENST00000553945 DPF3Q92784 378 aa26.82■■□□□ 1.88
NEK9-203ENST00000553945 CUL5Q93034 780 aa26.82■■□□□ 1.88
NEK9-203ENST00000553945 IL17RAQ96F46 866 aa26.82■■□□□ 1.88
NEK9-203ENST00000553945 NCOA5Q9HCD5 579 aaKnown RBP26.82■■□□□ 1.88
NEK9-203ENST00000553945 ZNF274Q96GC6 653 aaPredicted RBP26.81■■□□□ 1.88
NEK9-203ENST00000553945 SENP6Q9GZR1 1112 aaPredicted RBP26.81■■□□□ 1.88
NEK9-203ENST00000553945 ADAMTS4O75173 837 aa26.8■■□□□ 1.88
NEK9-203ENST00000553945 SMPD1P17405 629 aa26.8■■□□□ 1.88
NEK9-203ENST00000553945 STXBP2Q15833 593 aa26.8■■□□□ 1.88
NEK9-203ENST00000553945 WWC2Q6AWC2 1192 aa26.8■■□□□ 1.88
NEK9-203ENST00000553945 PSTPIP2Q9H939 334 aa26.8■■□□□ 1.88
NEK9-203ENST00000553945 SPC25Q9HBM1 224 aa26.8■■□□□ 1.88
NEK9-203ENST00000553945 NR3C2P08235 984 aa26.79■■□□□ 1.88
NEK9-203ENST00000553945 C6orf222P0C671 652 aaPredicted RBP26.79■■□□□ 1.88
NEK9-203ENST00000553945 STK3Q13188 491 aa26.79■■□□□ 1.88
NEK9-203ENST00000553945 TMEM63BQ5T3F8 832 aa26.79■■□□□ 1.88
NEK9-203ENST00000553945 USP17L6PQ6QN14 398 aa26.79■■□□□ 1.88
NEK9-203ENST00000553945 SMARCC2Q8TAQ2 1214 aa26.79■■□□□ 1.88
NEK9-203ENST00000553945 PDCD2LQ9BRP1 358 aa26.79■■□□□ 1.88
NEK9-203ENST00000553945 WDR11Q9BZH6 1224 aa26.79■■□□□ 1.88
NEK9-203ENST00000553945 ALDH8A1Q9H2A2 487 aaPredicted RBP26.79■■□□□ 1.88
NEK9-203ENST00000553945 RBM47A0AV96 593 aaKnown RBP26.78■■□□□ 1.88
NEK9-203ENST00000553945 MYCLP12524 364 aaPredicted RBP26.78■■□□□ 1.88
NEK9-203ENST00000553945 NAPAP54920 295 aa26.78■■□□□ 1.88
NEK9-203ENST00000553945 GJA9P57773 515 aa26.78■■□□□ 1.88
NEK9-203ENST00000553945 IRX5P78411 483 aaPredicted RBP26.78■■□□□ 1.88
NEK9-203ENST00000553945 PHKBQ93100 1093 aa26.78■■□□□ 1.88
NEK9-203ENST00000553945 AP5M1Q9H0R1 490 aa26.78■■□□□ 1.88
NEK9-203ENST00000553945 UPF3AQ9H1J1 476 aaKnown RBP26.78■■□□□ 1.88
NEK9-203ENST00000553945 GNEQ9Y223 722 aaKnown RBP26.78■■□□□ 1.88
NEK9-203ENST00000553945 MYADML2A6NDP7 307 aa26.77■■□□□ 1.88
NEK9-203ENST00000553945 PIK3CDO00329 1044 aa26.77■■□□□ 1.88
NEK9-203ENST00000553945 MEIS2O14770 477 aa26.77■■□□□ 1.88
NEK9-203ENST00000553945 DYNC1LI2O43237 492 aaPredicted RBP26.77■■□□□ 1.88
NEK9-203ENST00000553945 PTGS1P23219 599 aa26.77■■□□□ 1.88
NEK9-203ENST00000553945 AKAP17AQ02040 695 aaKnown RBP26.77■■□□□ 1.88
NEK9-203ENST00000553945 NTRK3Q16288 839 aa26.77■■□□□ 1.88
NEK9-203ENST00000553945 TLK2Q86UE8 772 aa26.77■■□□□ 1.88
NEK9-203ENST00000553945 KLHDC9Q8NEP7 349 aa26.77■■□□□ 1.88
NEK9-203ENST00000553945 SCFD2Q8WU76 684 aa26.77■■□□□ 1.88
NEK9-203ENST00000553945 FERMT2Q96AC1 680 aa26.77■■□□□ 1.88
NEK9-203ENST00000553945 STXBP3O00186 592 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 PRPF3O43395 683 aaKnown RBP26.76■■□□□ 1.87
NEK9-203ENST00000553945 PPFIA3O75145 1194 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 EIF3JO75822 258 aaKnown RBP26.76■■□□□ 1.87
NEK9-203ENST00000553945 NEK4P51957 841 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 AK2P54819 239 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 PGM5Q15124 567 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 ANKRD1Q15327 319 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 PFKFB3Q16875 520 aaPredicted RBP26.76■■□□□ 1.87
NEK9-203ENST00000553945 DUSP28Q4G0W2 176 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 SEPT14Q6ZU15 432 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 IL31RAQ8NI17 732 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 SLC26A6Q9BXS9 759 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 BARHL2Q9NY43 387 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 RBM27Q9P2N5 1060 aaKnown RBP26.76■■□□□ 1.87
NEK9-203ENST00000553945 PHF24Q9UPV7 400 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 ALPK3Q96L96 1907 aa26.76■■□□□ 1.87
NEK9-203ENST00000553945 hCG_1984214I3L0E3 225 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 EVI5O60447 810 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 SCG2P13521 617 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 IFNAR1P17181 557 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 CCND2P30279 289 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 ATN1P54259 1190 aaPredicted RBP26.75■■□□□ 1.87
NEK9-203ENST00000553945 KCNA10Q16322 511 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 UBE2SQ16763 222 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 GNASQ5JWF2 1037 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 TYW1BQ6NUM6 668 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 PPP1R18Q6NYC8 613 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 ZNF713Q8N859 430 aaPredicted RBP26.75■■□□□ 1.87
NEK9-203ENST00000553945 TSEN34Q9BSV6 310 aaKnown RBP26.75■■□□□ 1.87
NEK9-203ENST00000553945 C22orf23Q9BZE7 217 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 TPCN1Q9ULQ1 816 aa26.75■■□□□ 1.87
NEK9-203ENST00000553945 CPLX1O14810 134 aa26.74■■□□□ 1.87
NEK9-203ENST00000553945 TXNP10599 105 aaKnown RBP26.74■■□□□ 1.87
NEK9-203ENST00000553945 TTLL4Q14679 1199 aa26.74■■□□□ 1.87
NEK9-203ENST00000553945 VSIG10LQ86VR7 867 aa26.74■■□□□ 1.87
NEK9-203ENST00000553945 RNF26Q9BY78 433 aaPredicted RBP26.74■■□□□ 1.87
NEK9-203ENST00000553945 Q9Y3F1 56 aa26.74■■□□□ 1.87
NEK9-203ENST00000553945 KIAA1217Q5T5P2 1943 aa26.74■■□□□ 1.87
NEK9-203ENST00000553945 PDE4DIPQ5VU43 2346 aa26.73■■□□□ 1.87
NEK9-203ENST00000553945 CST5P28325 142 aaPredicted RBP26.73■■□□□ 1.87
NEK9-203ENST00000553945 ACLYP53396 1101 aa26.73■■□□□ 1.87
NEK9-203ENST00000553945 BEX3Q00994 111 aa26.73■■□□□ 1.87
NEK9-203ENST00000553945 LRRC26Q2I0M4 334 aa26.73■■□□□ 1.87
NEK9-203ENST00000553945 PCSK9Q8NBP7 692 aaKnown RBP26.73■■□□□ 1.87
NEK9-203ENST00000553945 SLKQ9H2G2 1235 aaPredicted RBP26.73■■□□□ 1.87
NEK9-203ENST00000553945 FRMPD4Q14CM0 1322 aa26.72■■□□□ 1.87
NEK9-203ENST00000553945 SMCO2A6NFE2 343 aa26.72■■□□□ 1.87
NEK9-203ENST00000553945 MOXD2PA6NHM9 499 aa26.72■■□□□ 1.87
NEK9-203ENST00000553945 CTAGE5O15320 804 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms