RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 FRMD3A2A2Y4 597 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 STXBP3O00186 592 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 DDAH1O94760 285 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 INHBEP58166 350 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 ECM1Q16610 540 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 PDS5AQ29RF7 1337 aaKnown RBP13.47□□□□□ -0.25
SPTB-206ENST00000553938 C2CD5Q86YS7 1000 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 CRACR2AQ9BSW2 395 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 SLC37A4O43826 429 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 HNRNPH1P31943 449 aaKnown RBP13.47□□□□□ -0.25
SPTB-206ENST00000553938 TXKP42681 527 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
SPTB-206ENST00000553938 CAGE1Q8TC20 777 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 HNRNPLLQ8WVV9 542 aaKnown RBP13.47□□□□□ -0.25
SPTB-206ENST00000553938 SCN7AQ01118 1682 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 PRPF6O94906 941 aaKnown RBP13.47□□□□□ -0.25
SPTB-206ENST00000553938 DDB1Q16531 1140 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 ARMC3Q5W041 872 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 FBXO33Q7Z6M2 555 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 ZNF513Q8N8E2 541 aaPredicted RBP13.47□□□□□ -0.25
SPTB-206ENST00000553938 TSEN2Q8NCE0 465 aaKnown RBP13.47□□□□□ -0.25
SPTB-206ENST00000553938 COA7Q96BR5 231 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 TMEM47Q9BQJ4 181 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 TRIM9Q9C026 710 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 BSDC1Q9NW68 430 aaPredicted RBP13.47□□□□□ -0.25
SPTB-206ENST00000553938 CAPN11Q9UMQ6 739 aa13.47□□□□□ -0.25
SPTB-206ENST00000553938 MYH1P12882 1939 aa13.46□□□□□ -0.25
SPTB-206ENST00000553938 ATP8B1O43520 1251 aa13.46□□□□□ -0.25
SPTB-206ENST00000553938 TDP2O95551 362 aa13.46□□□□□ -0.25
SPTB-206ENST00000553938 MTIF2P46199 727 aaKnown RBP13.46□□□□□ -0.25
SPTB-206ENST00000553938 GFPT1Q06210 699 aaPredicted RBP13.46□□□□□ -0.25
SPTB-206ENST00000553938 SH2D3CQ8N5H7 860 aa13.46□□□□□ -0.25
SPTB-206ENST00000553938 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
SPTB-206ENST00000553938 KBTBD4Q9NVX7 518 aa13.46□□□□□ -0.25
SPTB-206ENST00000553938 KIAA1551Q9HCM1 1747 aa13.46□□□□□ -0.25
SPTB-206ENST00000553938 POLD1P28340 1107 aa13.46□□□□□ -0.26
SPTB-206ENST00000553938 HIBADHP31937 336 aaKnown RBP13.46□□□□□ -0.26
SPTB-206ENST00000553938 ARID5AQ03989 594 aa13.46□□□□□ -0.26
SPTB-206ENST00000553938 WHAMMP3Q1A5X7 153 aa13.46□□□□□ -0.26
SPTB-206ENST00000553938 CCDC96Q2M329 555 aa13.46□□□□□ -0.26
SPTB-206ENST00000553938 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.26
SPTB-206ENST00000553938 SELENOOQ9BVL4 669 aa13.46□□□□□ -0.26
SPTB-206ENST00000553938 NLRC4Q9NPP4 1024 aa13.46□□□□□ -0.26
SPTB-206ENST00000553938 GBP6Q6ZN66 633 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 CABP7Q86V35 215 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 DZIP1Q86YF9 867 aaKnown RBP13.45□□□□□ -0.26
SPTB-206ENST00000553938 PIGSQ96S52 555 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 MKNK2Q9HBH9 465 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 NPHP3-ACAD11A0A0J9YXS1 232 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 PSMD14O00487 310 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 SEMA3EO15041 775 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 SRGNP10124 158 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 KCTD16Q68DU8 428 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 KIRREL3Q8IZU9 778 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 PIK3R5Q8WYR1 880 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 CRNKL1Q9BZJ0 848 aaKnown RBP13.45□□□□□ -0.26
SPTB-206ENST00000553938 EXOC1Q9NV70 894 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 MYMKA6NI61 221 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 ERLIN2O94905 339 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 UBE4AQ14139 1066 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 SLC30A10Q6XR72 485 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 CREG2Q8IUH2 290 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 MTMR8Q96EF0 704 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 MMRN2Q9H8L6 949 aa13.45□□□□□ -0.26
SPTB-206ENST00000553938 H7C1D1 291 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 ORC4O43929 436 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 TSPY3P0CV98 308 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 TSPY8P0CW00 308 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
SPTB-206ENST00000553938 RPS8P62241 208 aaKnown RBP13.44□□□□□ -0.26
SPTB-206ENST00000553938 FAXDC2Q96IV6 333 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 GPBP1L1Q9HC44 474 aaPredicted RBP13.44□□□□□ -0.26
SPTB-206ENST00000553938 MKRN1Q9UHC7 482 aaKnown RBP13.44□□□□□ -0.26
SPTB-206ENST00000553938 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 CAND2O75155 1236 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 LONP1P36776 959 aaKnown RBP13.44□□□□□ -0.26
SPTB-206ENST00000553938 RCAN1P53805 252 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 NAPAP54920 295 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 UBE2SQ16763 222 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 C12orf60Q5U649 245 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 KCNV1Q6PIU1 500 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 CCDC148Q8NFR7 591 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 TBCKQ8TEA7 893 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 ARL8AQ96BM9 186 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 MIEF2Q96C03 454 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 IKZF4Q9H2S9 585 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 USP17L5A8MUK1 530 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 RHOBTB3O94955 611 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 FAM153BP0C7A2 387 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 FAM153CQ494X1 144 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 EFCAB13Q8IY85 973 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 LRRC47Q8N1G4 583 aaKnown RBP13.44□□□□□ -0.26
SPTB-206ENST00000553938 P2RX5Q93086 422 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 FAM153AQ9UHL3 310 aa13.44□□□□□ -0.26
SPTB-206ENST00000553938 SLC1A4P43007 532 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 PARP10Q53GL7 1025 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 SND1Q7KZF4 910 aaKnown RBP eCLIP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms