RNA–Protein interactions for RNA: ENST00000553509.1

ATL1-203, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-203ENST00000553509 VTA1Q9NP79 307 aa15.33■□□□□ 0.04
ATL1-203ENST00000553509 SH2B1Q9NRF2 756 aaPredicted RBP15.33■□□□□ 0.04
ATL1-203ENST00000553509 SNAI1O95863 264 aaPredicted RBP15.32■□□□□ 0.04
ATL1-203ENST00000553509 AKR1A1P14550 325 aa15.32■□□□□ 0.04
ATL1-203ENST00000553509 CCND3P30281 292 aaPredicted RBP15.32■□□□□ 0.04
ATL1-203ENST00000553509 MCM2P49736 904 aa15.32■□□□□ 0.04
ATL1-203ENST00000553509 ACVR2BQ13705 512 aa15.32■□□□□ 0.04
ATL1-203ENST00000553509 ARHGEF16Q5VV41 709 aa15.32■□□□□ 0.04
ATL1-203ENST00000553509 U2AF1L4Q8WU68 220 aaKnown RBP15.32■□□□□ 0.04
ATL1-203ENST00000553509 TBC1D5Q92609 795 aa15.32■□□□□ 0.04
ATL1-203ENST00000553509 DEFB118Q96PH6 123 aa15.32■□□□□ 0.04
ATL1-203ENST00000553509 EHMT1Q9H9B1 1298 aa15.32■□□□□ 0.04
ATL1-203ENST00000553509 DDX20Q9UHI6 824 aaKnown RBP15.32■□□□□ 0.04
ATL1-203ENST00000553509 ZHX1Q9UKY1 873 aaPredicted RBP15.32■□□□□ 0.04
ATL1-203ENST00000553509 STK36Q9NRP7 1315 aa15.32■□□□□ 0.04
ATL1-203ENST00000553509 ESYT2A0FGR8 921 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 STXBP3O00186 592 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 SGPL1O95470 568 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 EDNRBP24530 442 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 HOXA13P31271 388 aaPredicted RBP15.31■□□□□ 0.04
ATL1-203ENST00000553509 ADCY7P51828 1080 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 SOX10P56693 466 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 ME3Q16798 604 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 MCTP2Q6DN12 878 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 WASF1Q92558 559 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 TAAR1Q96RJ0 339 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 SH3GLB2Q9NR46 395 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 PXMP2Q9NR77 195 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 FAM184BQ9ULE4 1060 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 ASTN1O14525 1302 aa15.31■□□□□ 0.04
ATL1-203ENST00000553509 SPDYE3A6NKU9 549 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 ZNF865P0CJ78 1059 aaPredicted RBP15.3■□□□□ 0.04
ATL1-203ENST00000553509 RARBP10826 455 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 XBP1P17861 261 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 GNA11P29992 359 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 STXBP2Q15833 593 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 PRAMEF19Q5SWL8 479 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 FCHSD1Q86WN1 690 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 ANKLE1Q8NAG6 615 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 TRPV1Q8NER1 839 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 BICD2Q8TD16 824 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 PURBQ96QR8 312 aaKnown RBP15.3■□□□□ 0.04
ATL1-203ENST00000553509 CRISPLD2Q9H0B8 497 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 C6orf50Q9HD87 102 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 RIC8AQ9NPQ8 531 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 COL20A1Q9P218 1284 aa15.3■□□□□ 0.04
ATL1-203ENST00000553509 FRMPD4Q14CM0 1322 aa15.29■□□□□ 0.04
ATL1-203ENST00000553509 POTEFA5A3E0 1075 aa15.29■□□□□ 0.04
ATL1-203ENST00000553509 SMCO2A6NFE2 343 aa15.29■□□□□ 0.04
ATL1-203ENST00000553509 MEIS2O14770 477 aa15.29■□□□□ 0.04
ATL1-203ENST00000553509 FOSP01100 380 aaPredicted RBP15.29■□□□□ 0.04
ATL1-203ENST00000553509 TFRCP02786 760 aaKnown RBP15.29■□□□□ 0.04
ATL1-203ENST00000553509 EIF2AK2P19525 551 aaKnown RBP15.29■□□□□ 0.04
ATL1-203ENST00000553509 PKN1Q16512 942 aa15.29■□□□□ 0.04
ATL1-203ENST00000553509 USP17L6PQ6QN14 398 aa15.29■□□□□ 0.04
ATL1-203ENST00000553509 PDCD2LQ9BRP1 358 aa15.29■□□□□ 0.04
ATL1-203ENST00000553509 ZMYND12Q9H0C1 365 aa15.29■□□□□ 0.04
ATL1-203ENST00000553509 MYH7BA7E2Y1 1941 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 STAM2O75886 525 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 LARGE1O95461 756 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 NR3C2P08235 984 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 CCND2P30279 289 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 PGM5Q15124 567 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 CCDC144BQ3MJ40 725 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 IQSEC1Q6DN90 963 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 XRRA1Q6P2D8 792 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 FBXO16Q8IX29 292 aaPredicted RBP15.28■□□□□ 0.04
ATL1-203ENST00000553509 NECAB1Q8N987 351 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 SCFD2Q8WU76 684 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 LLPHQ9BRT6 129 aaKnown RBP15.28■□□□□ 0.04
ATL1-203ENST00000553509 KATNBL1Q9H079 304 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 SPC25Q9HBM1 224 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 OGDHLQ9ULD0 1010 aa15.28■□□□□ 0.04
ATL1-203ENST00000553509 DUSP11O75319 330 aaKnown RBP15.27■□□□□ 0.04
ATL1-203ENST00000553509 EIF3JO75822 258 aaKnown RBP15.27■□□□□ 0.04
ATL1-203ENST00000553509 TNFAIP2Q03169 654 aa15.27■□□□□ 0.04
ATL1-203ENST00000553509 LHX8Q68G74 356 aa15.27■□□□□ 0.04
ATL1-203ENST00000553509 GALNT17Q6IS24 598 aa15.27■□□□□ 0.04
ATL1-203ENST00000553509 TYW1BQ6NUM6 668 aa15.27■□□□□ 0.04
ATL1-203ENST00000553509 EEPD1Q7L9B9 569 aa15.27■□□□□ 0.04
ATL1-203ENST00000553509 REXO1Q8N1G1 1221 aaKnown RBP15.27■□□□□ 0.04
ATL1-203ENST00000553509 ARRDC4Q8NCT1 418 aa15.27■□□□□ 0.04
ATL1-203ENST00000553509 XPNPEP3Q9NQH7 507 aa15.27■□□□□ 0.04
ATL1-203ENST00000553509 ORC3Q9UBD5 711 aaPredicted RBP15.27■□□□□ 0.04
ATL1-203ENST00000553509 NKRFO15226 690 aaKnown RBP eCLIP15.26■□□□□ 0.03
ATL1-203ENST00000553509 EN2P19622 333 aaPredicted RBP15.26■□□□□ 0.03
ATL1-203ENST00000553509 NLRP5P59047 1200 aa15.26■□□□□ 0.03
ATL1-203ENST00000553509 HMGN5P82970 282 aaKnown RBP15.26■□□□□ 0.03
ATL1-203ENST00000553509 TTLL4Q14679 1199 aa15.26■□□□□ 0.03
ATL1-203ENST00000553509 UBE2SQ16763 222 aa15.26■□□□□ 0.03
ATL1-203ENST00000553509 GNPTABQ3T906 1256 aa15.26■□□□□ 0.03
ATL1-203ENST00000553509 KCNV1Q6PIU1 500 aa15.26■□□□□ 0.03
ATL1-203ENST00000553509 POTEHQ6S545 545 aa15.26■□□□□ 0.03
ATL1-203ENST00000553509 CCDC83Q8IWF9 413 aa15.26■□□□□ 0.03
ATL1-203ENST00000553509 NSUN7Q8NE18 718 aaKnown RBP15.26■□□□□ 0.03
ATL1-203ENST00000553509 SHISA4Q96DD7 197 aa15.26■□□□□ 0.03
ATL1-203ENST00000553509 VPS54Q9P1Q0 977 aa15.26■□□□□ 0.03
ATL1-203ENST00000553509 RBM47A0AV96 593 aaKnown RBP15.25■□□□□ 0.03
ATL1-203ENST00000553509 KBTBD13C9JR72 458 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms