RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 NFE2L3Q9Y4A8 694 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 FAM196BA6NMK8 535 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 ALDH1A1P00352 501 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
ABCD4-218ENST00000553486 SLC1A4P43007 532 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 IREB2P48200 963 aaKnown RBP17.28■□□□□ 0.36
ABCD4-218ENST00000553486 INHBEP58166 350 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 SLFN13Q68D06 897 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 WNK4Q96J92 1243 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 GLT8D2Q9H1C3 349 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 R3HDMLQ9H3Y0 253 aa17.28■□□□□ 0.36
ABCD4-218ENST00000553486 ZNF70Q9UC06 446 aaPredicted RBP17.28■□□□□ 0.36
ABCD4-218ENST00000553486 MRPL12P52815 198 aaKnown RBP17.27■□□□□ 0.36
ABCD4-218ENST00000553486 ICA1Q05084 483 aa17.27■□□□□ 0.36
ABCD4-218ENST00000553486 SEPT2Q15019 361 aa17.27■□□□□ 0.36
ABCD4-218ENST00000553486 KARSQ15046 597 aaKnown RBP17.27■□□□□ 0.36
ABCD4-218ENST00000553486 CUL5Q93034 780 aa17.27■□□□□ 0.36
ABCD4-218ENST00000553486 CUEDC2Q9H467 287 aa17.27■□□□□ 0.36
ABCD4-218ENST00000553486 TMEM260Q9NX78 707 aa17.27■□□□□ 0.36
ABCD4-218ENST00000553486 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.27■□□□□ 0.36
ABCD4-218ENST00000553486 MKI67P46013 3256 aaKnown RBP17.27■□□□□ 0.35
ABCD4-218ENST00000553486 USP17L10C9JJH3 530 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 NRDCO43847 1150 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 USP2O75604 605 aaPredicted RBP17.26■□□□□ 0.35
ABCD4-218ENST00000553486 MYL1P05976 194 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 CASP1P29466 404 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 SLC16A2P36021 539 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 IFNL1Q8IU54 200 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 STAMQ92783 540 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 MAGEF1Q9HAY2 307 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 HERC5Q9UII4 1024 aaKnown RBP17.26■□□□□ 0.35
ABCD4-218ENST00000553486 RAD21O60216 631 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 FKTNO75072 461 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 SKILP12757 684 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 ZNF18P17022 549 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 CDC25AP30304 524 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 SEMA3FQ13275 785 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 SPATA1Q5VX52 437 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 ANKRD13AQ8IZ07 590 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 BLZF1Q9H2G9 400 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 BRCA2P51587 3418 aa17.26■□□□□ 0.35
ABCD4-218ENST00000553486 TPM2P07951 284 aa17.25■□□□□ 0.35
ABCD4-218ENST00000553486 CUL4BQ13620 913 aa17.25■□□□□ 0.35
ABCD4-218ENST00000553486 ARID5BQ14865 1188 aa17.25■□□□□ 0.35
ABCD4-218ENST00000553486 CABP7Q86V35 215 aa17.25■□□□□ 0.35
ABCD4-218ENST00000553486 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
ABCD4-218ENST00000553486 GMCL1P1Q8NEA9 526 aa17.25■□□□□ 0.35
ABCD4-218ENST00000553486 SYNRGQ9UMZ2 1314 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 PP2D1A8MPX8 630 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 PPP1R3GB7ZBB8 358 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 IGF2BP3O00425 579 aaKnown RBP eCLIP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 PPP1R11O60927 126 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 GDF11O95390 407 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 RPN1P04843 607 aaKnown RBP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 CLK2P49760 499 aaKnown RBP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 SIAH1Q8IUQ4 282 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 TEPSINQ96N21 525 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 MTRQ99707 1265 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.24■□□□□ 0.353e-6■■■■□ 20.7
ABCD4-218ENST00000553486 SYNPO2Q9UMS6 1093 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 F5H6K3 240 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 CD44P16070 742 aaKnown RBP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 SFPQP23246 707 aaKnown RBP eCLIP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 GJA5P36382 358 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 CCZ1BP86790 482 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 CCZ1P86791 482 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 KLRC3Q07444 240 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 CALCRLQ16602 461 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 TMEM266Q2M3C6 531 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 ZNF658Q5TYW1 1059 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 KLHL10Q6JEL2 608 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 FBXO46Q6PJ61 603 aaPredicted RBP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 VSTM4Q8IW00 320 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 CDAN1Q8IWY9 1227 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 FAM151AQ8WW52 585 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 GMCL1Q96IK5 515 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 NAP1L4Q99733 375 aaKnown RBP17.24■□□□□ 0.35
ABCD4-218ENST00000553486 PSTPIP2Q9H939 334 aa17.24■□□□□ 0.35
ABCD4-218ENST00000553486 TCP10L2B9ZVM9 353 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 GH2P01242 217 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 TECP42680 631 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 SHROOM1Q2M3G4 852 aaPredicted RBP17.23■□□□□ 0.35
ABCD4-218ENST00000553486 QRICH1Q2TAL8 776 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 POTEDQ86YR6 584 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 MTMR9Q96QG7 549 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 MED15Q96RN5 788 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 RAB34Q9BZG1 259 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 TMEM39BQ9GZU3 492 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 KBTBD4Q9NVX7 518 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 MYH7BA7E2Y1 1941 aa17.23■□□□□ 0.35
ABCD4-218ENST00000553486 TNNI2P48788 182 aa17.22■□□□□ 0.35
ABCD4-218ENST00000553486 KCNB1Q14721 858 aa17.22■□□□□ 0.35
ABCD4-218ENST00000553486 CDC37Q16543 378 aaPredicted RBP17.22■□□□□ 0.35
ABCD4-218ENST00000553486 PDE4DIPQ5VU43 2346 aa17.22■□□□□ 0.35
ABCD4-218ENST00000553486 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
ABCD4-218ENST00000553486 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
ABCD4-218ENST00000553486 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
ABCD4-218ENST00000553486 PRIMPOLQ96LW4 560 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms