RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 DDX49Q9Y6V7 483 aaKnown RBP11.65□□□□□ -0.54
ACTN1-208ENST00000553370 BAZ2BQ9UIF8 2168 aaKnown RBP11.65□□□□□ -0.54
ACTN1-208ENST00000553370 TRANK1O15050 2925 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 GRXCR1A8MXD5 290 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 DHX16O60231 1041 aaKnown RBP11.64□□□□□ -0.55
ACTN1-208ENST00000553370 ALDH5A1P51649 535 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-208ENST00000553370 PSMC6P62333 389 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 BAATQ14032 418 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-208ENST00000553370 PPP2R5BQ15173 497 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 USH1GQ495M9 461 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 RNF207Q6ZRF8 634 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 MFSD6Q6ZSS7 791 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 OTOP2Q7RTS6 562 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 RPUSD2Q8IZ73 545 aaKnown RBP11.64□□□□□ -0.55
ACTN1-208ENST00000553370 CRBNQ96SW2 442 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 PBX4Q9BYU1 374 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 WDR11Q9BZH6 1224 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 KATNBL1Q9H079 304 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 TRPV6Q9H1D0 765 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 RANBP17Q9H2T7 1088 aaKnown RBP11.64□□□□□ -0.55
ACTN1-208ENST00000553370 RNF41Q9H4P4 317 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-208ENST00000553370 PRDM12Q9H4Q4 367 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 SLC28A3Q9HAS3 691 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 IL17RBQ9NRM6 502 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 CHD7Q9P2D1 2997 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 ANAPC4Q9UJX5 808 aa11.64□□□□□ -0.55
ACTN1-208ENST00000553370 GNEQ9Y223 722 aaKnown RBP11.64□□□□□ -0.55
ACTN1-208ENST00000553370 PRRC2BQ5JSZ5 2229 aaKnown RBP11.64□□□□□ -0.55
ACTN1-208ENST00000553370 TET1Q8NFU7 2136 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 ASTN1O14525 1302 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 CCDC171Q6TFL3 1326 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 BDP1A6H8Y1 2624 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 A0A0D9SFI3 127 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 NFIBO00712 420 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 SUPT20HL2P0C7V6 817 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 PBX2P40425 430 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 PDE1AP54750 535 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 NMIQ13287 307 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-208ENST00000553370 TTBK2Q6IQ55 1244 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 SLC30A10Q6XR72 485 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 MICALL1Q8N3F8 863 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 FAM227BQ96M60 508 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 TMEM47Q9BQJ4 181 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 DIAPH3Q9NSV4 1193 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 Q9Y3F1 56 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
ACTN1-208ENST00000553370 BRWD1Q9NSI6 2320 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 B4GALT4O60513 344 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 CD4P01730 458 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 FGAP02671 866 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 ACTN1P12814 892 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 PTGS1P23219 599 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 ALX1Q15699 326 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 CCDC85BQ15834 202 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-208ENST00000553370 DUSP28Q4G0W2 176 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 PLPP6Q8IY26 295 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 HERVK_113Q902F9 699 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 ESR2Q92731 530 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
ACTN1-208ENST00000553370 MTG1Q9BT17 334 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-208ENST00000553370 NOC4LQ9BVI4 516 aaKnown RBP11.62□□□□□ -0.55
ACTN1-208ENST00000553370 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 NKX2-4Q9H2Z4 354 aa11.62□□□□□ -0.55
ACTN1-208ENST00000553370 TNKSO95271 1327 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 ZMYM6O95789 1325 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 UMODL1Q5DID0 1318 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 LOC102724159A0A0B4J2E5 919 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 CTAGE5O15320 804 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 FOXP2O15409 715 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 HSPD1P10809 573 aaKnown RBP11.61□□□□□ -0.55
ACTN1-208ENST00000553370 PDHBP11177 359 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 PCP11498 1178 aaKnown RBP11.61□□□□□ -0.55
ACTN1-208ENST00000553370 PWP2Q15269 919 aaKnown RBP11.61□□□□□ -0.55
ACTN1-208ENST00000553370 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 B4GALNT3Q6L9W6 998 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 TAPT1Q6NXT6 567 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 C16orf59Q7L2K0 433 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 DEFB128Q7Z7B8 93 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 IQCA1Q86XH1 822 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 RETREG2Q8NC44 543 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 SCFD2Q8WU76 684 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 SCLYQ96I15 445 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 FTOQ9C0B1 505 aaKnown RBP eCLIP11.61□□□□□ -0.55
ACTN1-208ENST00000553370 ALDH8A1Q9H2A2 487 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-208ENST00000553370 KAT14Q9H8E8 782 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 TRMT13Q9NUP7 481 aaKnown RBP11.61□□□□□ -0.55
ACTN1-208ENST00000553370 THEGQ9P2T0 379 aa11.61□□□□□ -0.55
ACTN1-208ENST00000553370 ZNF213O14771 459 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 NKRFO15226 690 aaKnown RBP eCLIP11.6□□□□□ -0.55
ACTN1-208ENST00000553370 PFKMP08237 780 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 GOLGA8HP0CJ92 632 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 CYP2C9P11712 490 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
ACTN1-208ENST00000553370 NKX3-2P78367 333 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 TTLL4Q14679 1199 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 SKIV2LQ15477 1246 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms