RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 CAPN15O75808 1086 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 DDAH1O94760 285 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 PRPF6O94906 941 aaKnown RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 ECEL1O95672 775 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 SUGP1Q8IWZ8 645 aaKnown RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 NOA1Q8NC60 698 aaKnown RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 FAM76AQ8TAV0 307 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 DRC1Q96MC2 740 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 CD209Q9NNX6 404 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 KCNJ18B7U540 433 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 H7C1D1 291 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 SYF2O95926 243 aaKnown RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 HOXA10P31260 410 aaPredicted RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 CYLC1P35663 651 aaPredicted RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 USP8P40818 1118 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 KCNJ12Q14500 433 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 TCP11X2Q5H9J9 407 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 RRAGBQ5VZM2 374 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 USP49Q70CQ1 688 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 ZNF804AQ7Z570 1209 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 CATIPQ7Z7H3 387 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 TADA2BQ86TJ2 420 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 PRPF38AQ8NAV1 312 aaKnown RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 WDR66Q8TBY9 1149 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 SYMPKQ92797 1274 aaKnown RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 SLF1Q9BQI6 1058 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 V9GY48 417 aaPredicted RBP8.18□□□□□ -1.1
BEST3-212ENST00000553096 ARFGEF1Q9Y6D6 1849 aa8.18□□□□□ -1.1
BEST3-212ENST00000553096 A0A0U1RQJ8 604 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 USP17L3A6NCW0 530 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 USP17L4A6NCW7 530 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 PHACTR2O75167 634 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 NAT1P18440 290 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 CCT6AP40227 531 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 PPP4CP60510 307 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 RBM26Q5T8P6 1007 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 ZNF658Q5TYW1 1059 aaPredicted RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 MSL1Q68DK7 614 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 WWC2Q6AWC2 1192 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 NCAPH2Q6IBW4 605 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 USP17L1Q7RTZ2 530 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 RPAINQ86UA6 219 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 IQCA1Q86XH1 822 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 COL23A1Q86Y22 540 aaPredicted RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 AMOTL1Q8IY63 956 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 TBC1D16Q8TBP0 767 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 NOC3LQ8WTT2 800 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 TGFBRAP1Q8WUH2 860 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 ATRIPQ8WXE1 791 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 DNAJC7Q99615 494 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 GUCA1BQ9UMX6 200 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 LUC7L2Q9Y383 392 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 A0A087X0B3 334 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 GOLGA8KD6RF30 607 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 H0YHG0 523 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 KIF3CO14782 793 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 ATP2B1P20020 1258 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 EEF1GP26641 437 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 CALRP27797 417 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 TRAPPC10P48553 1259 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 SARNPP82979 210 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 PPFIA1Q13136 1202 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 PACS2Q86VP3 889 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 MAPKAPK5Q8IW41 473 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 IQCDQ96DY2 449 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 RBM17Q96I25 401 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 NUP58Q9BVL2 599 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 TSGA10Q9BZW7 698 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 ZNHIT6Q9NWK9 470 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 SAP30BPQ9UHR5 308 aaKnown RBP8.17□□□□□ -1.1
BEST3-212ENST00000553096 PSME4Q14997 1843 aa8.17□□□□□ -1.1
BEST3-212ENST00000553096 SHTN1A0MZ66 631 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 OPA1O60313 960 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 BTDP43251 543 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 UBXN1Q04323 297 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 ITIH3Q06033 890 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 CCDC122Q5T0U0 273 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 MMS22LQ6ZRQ5 1243 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 KIAA1328Q86T90 577 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 CCDC170Q8IYT3 715 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 RETREG2Q8NC44 543 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 CAGE1Q8TC20 777 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 NELFBQ8WX92 580 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 EPSTI1Q96J88 318 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 VPS16Q9H269 839 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 IRAK4Q9NWZ3 460 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 TAB2Q9NYJ8 693 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 GGA1Q9UJY5 639 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 NUB1Q9Y5A7 615 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 TSPY2A6NKD2 308 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 EBAG9O00559 213 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 CALM1P0DP23 149 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 CALM2P0DP24 149 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 CALM3P0DP25 149 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 ATP2B4P23634 1241 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 ATP2C1P98194 919 aaPredicted RBP8.16□□□□□ -1.1
BEST3-212ENST00000553096 TFAP4Q01664 338 aa8.16□□□□□ -1.1
BEST3-212ENST00000553096 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms