RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 Q3C1V9 767 aa11.56□□□□□ -0.56
MMP19-209ENST00000552872 SH3D19Q5HYK7 790 aa11.56□□□□□ -0.56
MMP19-209ENST00000552872 WDR78Q5VTH9 848 aa11.56□□□□□ -0.56
MMP19-209ENST00000552872 SNRNP48Q6IEG0 339 aaKnown RBP11.56□□□□□ -0.56
MMP19-209ENST00000552872 FCHSD1Q86WN1 690 aa11.56□□□□□ -0.56
MMP19-209ENST00000552872 FAM200AQ8TCP9 573 aa11.56□□□□□ -0.56
MMP19-209ENST00000552872 C12orf42Q96LP6 360 aa11.56□□□□□ -0.56
MMP19-209ENST00000552872 ST7Q9NRC1 585 aa11.56□□□□□ -0.56
MMP19-209ENST00000552872 AGTPBP1Q9UPW5 1226 aa11.56□□□□□ -0.56
MMP19-209ENST00000552872 CTDP1Q9Y5B0 961 aaPredicted RBP11.56□□□□□ -0.56
MMP19-209ENST00000552872 CYP2C19P33261 490 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 HERVK_113P62684 666 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 ANKRD13CQ8N6S4 541 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 WASF1Q92558 559 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 AMNQ9BXJ7 453 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 SLC38A10Q9HBR0 1119 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 GTF2A2P52657 109 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 RAD51AP2Q09MP3 1159 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 SMCR8Q8TEV9 937 aaPredicted RBP11.55□□□□□ -0.56
MMP19-209ENST00000552872 ZBTB9Q96C00 473 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 PSTPIP2Q9H939 334 aa11.55□□□□□ -0.56
MMP19-209ENST00000552872 CETPP11597 493 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 KRT2P35908 639 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 FAM160B2Q86V87 743 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 PROCA1Q8NCQ7 364 aaPredicted RBP11.54□□□□□ -0.56
MMP19-209ENST00000552872 GJA10Q969M2 543 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 ZNF214Q9UL59 606 aaPredicted RBP11.54□□□□□ -0.56
MMP19-209ENST00000552872 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 PCDHA6Q9UN73 950 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 PCDHA8Q9Y5H6 950 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 MYH15Q9Y2K3 1946 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 ADCY7P51828 1080 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 SETQ01105 290 aaPredicted RBP11.54□□□□□ -0.56
MMP19-209ENST00000552872 INF2Q27J81 1249 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 BLIDQ8IZY5 108 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 CPA4Q9UI42 421 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 CLIC4Q9Y696 253 aa11.54□□□□□ -0.56
MMP19-209ENST00000552872 MYH7BA7E2Y1 1941 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 DOCK3Q8IZD9 2030 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.53□□□□□ -0.56
MMP19-209ENST00000552872 LOC102724159A0A0B4J2E5 919 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 ZBED4O75132 1171 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 SLC10A3P09131 477 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 XBP1P17861 261 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 CALML3P27482 149 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 TNNT3P45378 269 aaPredicted RBP11.53□□□□□ -0.56
MMP19-209ENST00000552872 TOB1P50616 345 aaPredicted RBP11.53□□□□□ -0.56
MMP19-209ENST00000552872 APLP1P51693 650 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 PWP2Q15269 919 aaKnown RBP11.53□□□□□ -0.56
MMP19-209ENST00000552872 FBXO38Q6PIJ6 1188 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 SLC30A10Q6XR72 485 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 FASTKD5Q7L8L6 764 aaKnown RBP11.53□□□□□ -0.56
MMP19-209ENST00000552872 CCDC186Q7Z3E2 898 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 NOSTRINQ8IVI9 506 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 USP28Q96RU2 1077 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 MYCBPQ99417 103 aaPredicted RBP11.53□□□□□ -0.56
MMP19-209ENST00000552872 RBPJLQ9UBG7 517 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 PCDHA4Q9UN74 947 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 CNMDO75829 334 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 ICAM1P05362 532 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 LRMPQ12912 555 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 SAFBQ15424 915 aaKnown RBP eCLIP11.53□□□□□ -0.56
MMP19-209ENST00000552872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.53□□□□□ -0.56
MMP19-209ENST00000552872 NCAPG2Q86XI2 1143 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 CAPNS2Q96L46 248 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 ZMYND12Q9H0C1 365 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 PORCNQ9H237 461 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 HOXC10Q9NYD6 342 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 COL20A1Q9P218 1284 aa11.53□□□□□ -0.56
MMP19-209ENST00000552872 LAMA2P24043 3122 aaKnown RBP11.52□□□□□ -0.56
MMP19-209ENST00000552872 MEIS2O14770 477 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 ZBTB48P10074 688 aaPredicted RBP11.52□□□□□ -0.57
MMP19-209ENST00000552872 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 STAT3P40763 770 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 SATB1Q01826 763 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 ZNF174Q15697 407 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 DEFB115Q30KQ5 88 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 CLEC4DQ8WXI8 215 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 RNF146Q9NTX7 359 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 CEP83Q9Y592 693 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 PCDHB6Q9Y5E3 794 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 MARCKSP29966 332 aaPredicted RBP11.52□□□□□ -0.57
MMP19-209ENST00000552872 HOXA7P31268 230 aaPredicted RBP11.52□□□□□ -0.57
MMP19-209ENST00000552872 FSTL1Q12841 308 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 TPD52L1Q16890 204 aaPredicted RBP11.52□□□□□ -0.57
MMP19-209ENST00000552872 REXO1Q8N1G1 1221 aaKnown RBP11.52□□□□□ -0.57
MMP19-209ENST00000552872 CUL5Q93034 780 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 TNFRSF25Q93038 417 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 C6orf50Q9HD87 102 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.52□□□□□ -0.57
MMP19-209ENST00000552872 TSKSQ9UJT2 592 aa11.52□□□□□ -0.57
MMP19-209ENST00000552872 V9GYY5 206 aaPredicted RBP11.52□□□□□ -0.57
MMP19-209ENST00000552872 ZSWIM8A7E2V4 1837 aa11.51□□□□□ -0.57
MMP19-209ENST00000552872 M0R2N6 131 aa11.51□□□□□ -0.57
MMP19-209ENST00000552872 PGK2P07205 417 aa11.51□□□□□ -0.57
MMP19-209ENST00000552872 OSBPP22059 807 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms