RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 GOLPH3LQ9H4A5 285 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 HOMER2Q9NSB8 354 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 CCDC39Q9UFE4 941 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 USP25Q9UHP3 1055 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 ZNF214Q9UL59 606 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-206ENST00000552608 KCNH3Q9ULD8 1083 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 HPSEQ9Y251 543 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 GOLGB1Q14789 3259 aaKnown RBP12.39□□□□□ -0.43
LINC00661-206ENST00000552608 CCL15-CCL14A0A0B4J2E2 113 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 NFIBO00712 420 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 WNT7AO00755 349 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 TBX3O15119 743 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 ZNF202O95125 648 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 TDP2O95551 362 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 SLC25A27O95847 323 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 TAL1P17542 331 aaPredicted RBP12.38□□□□□ -0.43
LINC00661-206ENST00000552608 UBA7P41226 1012 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 HERVK_113P62684 666 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 SNW1Q13573 536 aaKnown RBP12.38□□□□□ -0.43
LINC00661-206ENST00000552608 CCL15Q16663 113 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 Q4G0T1 1027 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 LRSAM1Q6UWE0 723 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 ANKRD23Q86SG2 305 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 RIOX2Q8IUF8 465 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 CLEC4DQ8WXI8 215 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 MBOAT7Q96N66 472 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 P2RX7Q99572 595 aaKnown RBP12.38□□□□□ -0.43
LINC00661-206ENST00000552608 SDF4Q9BRK5 362 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 STK24Q9Y6E0 443 aa12.38□□□□□ -0.43
LINC00661-206ENST00000552608 SYCE3A1L190 88 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 CIITAP33076 1130 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 GJA5P36382 358 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 TXKP42681 527 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 SETQ01105 290 aaPredicted RBP12.37□□□□□ -0.43
LINC00661-206ENST00000552608 ZRSR1Q15695 479 aaKnown RBP12.37□□□□□ -0.43
LINC00661-206ENST00000552608 MUM1L1Q5H9M0 696 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 SPRYD7Q5W111 196 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 RASSF8Q8NHQ8 419 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 CRYGNQ8WXF5 182 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
LINC00661-206ENST00000552608 PAGR1Q9BTK6 254 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 MRVI1Q9Y6F6 885 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 PFASO15067 1338 aa12.37□□□□□ -0.43
LINC00661-206ENST00000552608 FXR2P51116 673 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00661-206ENST00000552608 RPS6P62753 249 aaKnown RBP12.36□□□□□ -0.43
LINC00661-206ENST00000552608 GRIN1Q05586 938 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 MOGSQ13724 837 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 PDIA5Q14554 519 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 CAMK4Q16566 473 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 CST9Q5W186 159 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 GPAT2Q6NUI2 795 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 XRRA1Q6P2D8 792 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 SASS6Q6UVJ0 657 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 KRBA2Q6ZNG9 492 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 ELOA2Q8IYF1 753 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-206ENST00000552608 CEP57L1Q8IYX8 460 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 CNNM3Q8NE01 707 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 SYTL5Q8TDW5 730 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-206ENST00000552608 SMCR8Q8TEV9 937 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-206ENST00000552608 TBC1D5Q92609 795 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 CALML4Q96GE6 196 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 FAM20AQ96MK3 541 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 MTMR9Q96QG7 549 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 MPHOSPH6Q99547 160 aaKnown RBP12.36□□□□□ -0.43
LINC00661-206ENST00000552608 SPATC1LQ9H0A9 340 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 LRWD1Q9UFC0 647 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 RPTORQ8N122 1335 aa12.36□□□□□ -0.43
LINC00661-206ENST00000552608 GOLGA6L3A6NEY3 463 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 MANSC4A6NHS7 340 aaPredicted RBP12.35□□□□□ -0.43
LINC00661-206ENST00000552608 B4DLN1 442 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 POLR2DO15514 142 aaKnown RBP12.35□□□□□ -0.43
LINC00661-206ENST00000552608 SLC26A4O43511 780 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 SLC37A4O43826 429 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 CCDC192P0DO97 292 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
LINC00661-206ENST00000552608 ZNF157P51786 506 aaPredicted RBP12.35□□□□□ -0.43
LINC00661-206ENST00000552608 CCNA1P78396 465 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 PRR16Q569H4 304 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 SPECC1Q5M775 1068 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 ARHGEF16Q5VV41 709 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 KRT79Q5XKE5 535 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 PCNX4Q63HM2 1172 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 RGMBQ6NW40 437 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 NCAPG2Q86XI2 1143 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 ANKRD35Q8N283 1001 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 IQUBQ8NA54 791 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 ERMNQ8TAM6 284 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 CDK5RAP3Q96JB5 506 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 PARK7Q99497 189 aaKnown RBP12.35□□□□□ -0.43
LINC00661-206ENST00000552608 CCSER1Q9C0I3 900 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 TSPY26PQ9H489 355 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 KCNMB3Q9NPA1 279 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 PCDHA12Q9UN75 941 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 RIPK3Q9Y572 518 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 FRMPD4Q14CM0 1322 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 PASKQ96RG2 1323 aa12.35□□□□□ -0.43
LINC00661-206ENST00000552608 PDHXO00330 501 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms