RNA–Protein interactions for RNA: ENST00000552125.1

TUBA1C-208, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-208ENST00000552125 CHMP4CQ96CF2 233 aa12.53□□□□□ -0.4
TUBA1C-208ENST00000552125 RNPC3Q96LT9 517 aaKnown RBP12.53□□□□□ -0.4
TUBA1C-208ENST00000552125 MTG1Q9BT17 334 aaPredicted RBP12.53□□□□□ -0.4
TUBA1C-208ENST00000552125 ALDH8A1Q9H2A2 487 aaPredicted RBP12.53□□□□□ -0.4
TUBA1C-208ENST00000552125 CUL9Q8IWT3 2517 aa12.53□□□□□ -0.4
TUBA1C-208ENST00000552125 CDH23Q9H251 3354 aa12.52□□□□□ -0.4
TUBA1C-208ENST00000552125 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 ERICH2A1L162 156 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 EIF3JO75822 258 aaKnown RBP12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 PFKMP08237 780 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 HOXD8P13378 290 aaPredicted RBP12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 STXBP2Q15833 593 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 USH1GQ495M9 461 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 TMEM240Q5SV17 173 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 KCNV1Q6PIU1 500 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 Q7L0L9 218 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 C16orf59Q7L2K0 433 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 SESTD1Q86VW0 696 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 TEX2Q8IWB9 1127 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 MB21D2Q8IYB1 491 aaPredicted RBP12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 TMTC2Q8N394 836 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 IGDCC4Q8TDY8 1250 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 VTI1AQ96AJ9 217 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 GUCD1Q96NT3 240 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 RMDN3Q96TC7 470 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 NOC4LQ9BVI4 516 aaKnown RBP12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 CPVLQ9H3G5 476 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 IL23AQ9NPF7 189 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 COL20A1Q9P218 1284 aa12.52□□□□□ -0.41
TUBA1C-208ENST00000552125 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 IFIT3O14879 490 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 DDAH1O94760 285 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 TXNP10599 105 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 TGFB3P10600 412 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 WTAPQ15007 396 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 TMEM63BQ5T3F8 832 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 OR6J1Q8NGC5 347 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 HERVK_113Q902F9 699 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.411e-12■■■□□ 17.4
TUBA1C-208ENST00000552125 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 SEMA6BQ9H3T3 888 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 HIPK3Q9H422 1215 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 PXMP2Q9NR77 195 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 DDX49Q9Y6V7 483 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 FRMPD4Q14CM0 1322 aa12.51□□□□□ -0.41
TUBA1C-208ENST00000552125 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 B4GALT4O60513 344 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 STAM2O75886 525 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 GH1P01241 217 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 NR3C2P08235 984 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 CSF2RAP15509 400 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 RFC2P35250 354 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 LIFRP42702 1097 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 ANTXR2P58335 489 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 RBL2Q08999 1139 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 TBC1D5Q92609 795 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 TMEM87BQ96K49 555 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 LZTS2Q9BRK4 669 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 LSG1Q9H089 658 aaKnown RBP12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 MTIF3Q9H2K0 278 aaKnown RBP12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 PCDHA1Q9Y5I3 950 aa12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 RBM8AQ9Y5S9 174 aaKnown RBP12.5□□□□□ -0.41
TUBA1C-208ENST00000552125 BAZ2BQ9UIF8 2168 aaKnown RBP12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 TANC1Q9C0D5 1861 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 CYTH3O43739 400 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 ARIH2O95376 493 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 KIF5BP33176 963 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 ARHGAP1Q07960 439 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 NECTIN1Q15223 517 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 CATIPQ7Z7H3 387 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 VSIG10LQ86VR7 867 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 PDCD2LQ9BRP1 358 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 TTYH1Q9H313 450 aaPredicted RBP12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 LY9Q9HBG7 655 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 DDX41Q9UJV9 622 aaKnown RBP12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 CHD9Q3L8U1 2897 aa12.49□□□□□ -0.41
TUBA1C-208ENST00000552125 PIK3CDO00329 1044 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 DHX16O60231 1041 aaKnown RBP12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 PARNO95453 639 aaKnown RBP12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 MMP3P08254 477 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 MCM5P33992 734 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 GNAQP50148 359 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 LAMC2Q13753 1193 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 TSGA10IPQ3SY00 556 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 TMEM67Q5HYA8 995 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 ARHGEF16Q5VV41 709 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 XRRA1Q6P2D8 792 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 PPTC7Q8NI37 304 aa12.48□□□□□ -0.41
TUBA1C-208ENST00000552125 TRPV6Q9H1D0 765 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms