RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 NSUN6Q8TEA1 469 aaKnown RBP17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 CUL5Q93034 780 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 ZFP91Q96JP5 570 aaPredicted RBP17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 KATNBL1Q9H079 304 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 PXMP2Q9NR77 195 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 PDGFCQ9NRA1 345 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 VPS54Q9P1Q0 977 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 ZHX1Q9UKY1 873 aaPredicted RBP17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 CNPY2Q9Y2B0 182 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 PIK3CDO00329 1044 aa17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 CDKL5O76039 1030 aa17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 DEXIO95424 95 aa17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 GJB1P08034 283 aa17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 EN2P19622 333 aaPredicted RBP17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 LHX8Q68G74 356 aa17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 NSUN7Q8NE18 718 aaKnown RBP17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 ABHD16BQ9H3Z7 469 aa17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 RIC8AQ9NPQ8 531 aa17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 GJB4Q9NTQ9 266 aa17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 TMEM260Q9NX78 707 aa17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 ORC3Q9UBD5 711 aaPredicted RBP17.43■□□□□ 0.38
SMARCD1-211ENST00000551497 hCG_1984214I3L0E3 225 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 SGPL1O95470 568 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 NR3C2P08235 984 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 EDNRBP24530 442 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 ADCY7P51828 1080 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 MRPL12P52815 198 aaKnown RBP17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 PDE4DQ08499 809 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 TMEM63BQ5T3F8 832 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 TAPT1Q6NXT6 567 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 FBXO16Q8IX29 292 aaPredicted RBP17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 ZNF713Q8N859 430 aaPredicted RBP17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 IL31RAQ8NI17 732 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 U2AF1L4Q8WU68 220 aaKnown RBP17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 TMX3Q96JJ7 454 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 SH2B1Q9NRF2 756 aaPredicted RBP17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 NRBP1Q9UHY1 535 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 CENPFP49454 3210 aa17.42■□□□□ 0.38
SMARCD1-211ENST00000551497 SEPT4O43236 478 aa17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 TFRCP02786 760 aaKnown RBP17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 MYCLP12524 364 aaPredicted RBP17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 CCDC144BQ3MJ40 725 aa17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 PPP1R18Q6NYC8 613 aa17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 LENG1Q96BZ8 264 aaPredicted RBP17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 IWS1Q96ST2 819 aa17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 PDCD2LQ9BRP1 358 aa17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 ZMYND12Q9H0C1 365 aa17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 DDX20Q9UHI6 824 aaKnown RBP17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 PCDHA6Q9UN73 950 aa17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 PCDHA8Q9Y5H6 950 aa17.41■□□□□ 0.38
SMARCD1-211ENST00000551497 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 LOC102724159A0A0B4J2E5 919 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 B4DLN1 442 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 ADCY6O43306 1168 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 PTGS1P23219 599 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 ADCYAP1R1P41586 468 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 GJA8P48165 433 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 NLRP5P59047 1200 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 PGM5Q15124 567 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 PWP2Q15269 919 aaKnown RBP17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 IL27Q8NEV9 243 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 PGBD1Q96JS3 809 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 CRISPLD2Q9H0B8 497 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 SH3GLB2Q9NR46 395 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 FAM184BQ9ULE4 1060 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 KCNJ14Q9UNX9 436 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 STK36Q9NRP7 1315 aa17.4■□□□□ 0.38
SMARCD1-211ENST00000551497 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 ESYT2A0FGR8 921 aa17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 STXBP2Q15833 593 aa17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 JAKMIP3Q5VZ66 844 aa17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 SEPT14Q6ZU15 432 aa17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 VSIG10LQ86VR7 867 aa17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 CCDC12Q8WUD4 166 aaPredicted RBP17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 MPHOSPH6Q99547 160 aaKnown RBP17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 LLPHQ9BRT6 129 aaKnown RBP17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 ALG1Q9BT22 464 aa17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 VTA1Q9NP79 307 aa17.39■□□□□ 0.37
SMARCD1-211ENST00000551497 EIF3JO75822 258 aaKnown RBP17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 SLC34A2O95436 690 aa17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 AKR1A1P14550 325 aa17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 SMPD1P17405 629 aa17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 MCM2P49736 904 aa17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 CLK2P49760 499 aaKnown RBP17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 FOSBP53539 338 aa17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 MRPS9P82933 396 aaKnown RBP17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 GJC2Q5T442 439 aaPredicted RBP17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 RTEL1Q9NZ71 1219 aa17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 OGDHLQ9ULD0 1010 aa17.38■□□□□ 0.37
SMARCD1-211ENST00000551497 RBM47A0AV96 593 aaKnown RBP17.37■□□□□ 0.37
SMARCD1-211ENST00000551497 SPDYE3A6NKU9 549 aa17.37■□□□□ 0.37
SMARCD1-211ENST00000551497 RGS20O76081 388 aa17.37■□□□□ 0.37
SMARCD1-211ENST00000551497 GNA11P29992 359 aa17.37■□□□□ 0.37
SMARCD1-211ENST00000551497 IRX5P78411 483 aaPredicted RBP17.37■□□□□ 0.37
SMARCD1-211ENST00000551497 TNFAIP2Q03169 654 aa17.37■□□□□ 0.37
SMARCD1-211ENST00000551497 NPY5RQ15761 445 aa17.37■□□□□ 0.37
SMARCD1-211ENST00000551497 IQSEC1Q6DN90 963 aa17.37■□□□□ 0.37
SMARCD1-211ENST00000551497 CCDC148Q8NFR7 591 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms