RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 MRPL12P52815 198 aaKnown RBP25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 NBPF20Q3BBV1 942 aa25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 CWC27Q6UX04 472 aaKnown RBP25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 IQCA1Q86XH1 822 aa25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 COPS5Q92905 334 aa25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 SLC4A7Q9Y6M7 1214 aa25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 PFKMP08237 780 aa25.4■■□□□ 1.66
SMARCC2-210ENST00000550519 TXNP10599 105 aaKnown RBP25.4■■□□□ 1.66
SMARCC2-210ENST00000550519 ADGRE1Q14246 886 aa25.4■■□□□ 1.66
SMARCC2-210ENST00000550519 CDC37Q16543 378 aaPredicted RBP25.4■■□□□ 1.66
SMARCC2-210ENST00000550519 NFRKBQ6P4R8 1299 aa25.4■■□□□ 1.66
SMARCC2-210ENST00000550519 SLC28A3Q9HAS3 691 aa25.4■■□□□ 1.66
SMARCC2-210ENST00000550519 MYO9BQ13459 2157 aa25.39■■□□□ 1.66
SMARCC2-210ENST00000550519 SCN10AQ9Y5Y9 1956 aa25.39■■□□□ 1.66
SMARCC2-210ENST00000550519 ARIH2O95376 493 aa25.39■■□□□ 1.66
SMARCC2-210ENST00000550519 TJAP1Q5JTD0 557 aa25.39■■□□□ 1.66
SMARCC2-210ENST00000550519 TBC1D5Q92609 795 aa25.39■■□□□ 1.66
SMARCC2-210ENST00000550519 ZSCAN10Q96SZ4 725 aaPredicted RBP25.39■■□□□ 1.66
SMARCC2-210ENST00000550519 DSCC1Q9BVC3 393 aa25.39■■□□□ 1.66
SMARCC2-210ENST00000550519 KAT14Q9H8E8 782 aa25.39■■□□□ 1.66
SMARCC2-210ENST00000550519 DIAPH3Q9NSV4 1193 aa25.39■■□□□ 1.66
SMARCC2-210ENST00000550519 B4E1Z4 1266 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 RABGGTBP53611 331 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 PTPN11Q06124 597 aaPredicted RBP25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 TTLL4Q14679 1199 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 ASPRV1Q53RT3 343 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 FAM47CQ5HY64 1035 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 CCDC62Q6P9F0 684 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 ADGRF4Q8IZF3 695 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 PRDM6Q9NQX0 595 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 ZSWIM5Q9P217 1185 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 CHD7Q9P2D1 2997 aa25.38■■□□□ 1.65
SMARCC2-210ENST00000550519 ABCB11O95342 1321 aa25.37■■□□□ 1.65
SMARCC2-210ENST00000550519 HIP1O00291 1037 aa25.37■■□□□ 1.65
SMARCC2-210ENST00000550519 ENAHQ8N8S7 591 aaPredicted RBP25.37■■□□□ 1.65
SMARCC2-210ENST00000550519 SYTL5Q8TDW5 730 aaPredicted RBP25.37■■□□□ 1.65
SMARCC2-210ENST00000550519 PPM1EQ8WY54 764 aa25.37■■□□□ 1.65
SMARCC2-210ENST00000550519 COL20A1Q9P218 1284 aa25.37■■□□□ 1.65
SMARCC2-210ENST00000550519 PCDHA11Q9Y5I1 949 aa25.37■■□□□ 1.65
SMARCC2-210ENST00000550519 ZBBXA8MT70 800 aa25.36■■□□□ 1.65
SMARCC2-210ENST00000550519 PPP1R13LQ8WUF5 828 aa25.36■■□□□ 1.65
SMARCC2-210ENST00000550519 TAAR1Q96RJ0 339 aa25.36■■□□□ 1.65
SMARCC2-210ENST00000550519 PITPNM1O00562 1244 aa25.35■■□□□ 1.65
SMARCC2-210ENST00000550519 ATP2A2P16615 1042 aaKnown RBP25.35■■□□□ 1.65
SMARCC2-210ENST00000550519 RFC2P35250 354 aa25.35■■□□□ 1.65
SMARCC2-210ENST00000550519 IMMTQ16891 758 aaKnown RBP25.35■■□□□ 1.65
SMARCC2-210ENST00000550519 QRICH1Q2TAL8 776 aa25.35■■□□□ 1.65
SMARCC2-210ENST00000550519 DEFB128Q7Z7B8 93 aa25.35■■□□□ 1.65
SMARCC2-210ENST00000550519 MCF2L2Q86YR7 1114 aa25.35■■□□□ 1.65
SMARCC2-210ENST00000550519 NSUN6Q8TEA1 469 aaKnown RBP25.35■■□□□ 1.65
SMARCC2-210ENST00000550519 IQCF3P0C7M6 154 aa25.34■■□□□ 1.65
SMARCC2-210ENST00000550519 MYOGP15173 224 aa25.34■■□□□ 1.65
SMARCC2-210ENST00000550519 IGFBP4P22692 258 aa25.34■■□□□ 1.65
SMARCC2-210ENST00000550519 IWS1Q96ST2 819 aa25.34■■□□□ 1.65
SMARCC2-210ENST00000550519 JMJD4Q9H9V9 463 aa25.34■■□□□ 1.65
SMARCC2-210ENST00000550519 CTNNA3Q9UI47 895 aa25.34■■□□□ 1.65
SMARCC2-210ENST00000550519 LAMA4Q16363 1823 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 PARP1P09874 1014 aaKnown RBP25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 ARHGAP1Q07960 439 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 LY6KQ17RY6 165 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 PPP2R2DQ66LE6 453 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 SEPT14Q6ZU15 432 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 FBXO11Q86XK2 927 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 RETREG2Q8NC44 543 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 AFG1LQ8WV93 481 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 ATXN2LQ8WWM7 1075 aaKnown RBP25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 RMDN3Q96TC7 470 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 KRT23Q9C075 422 aa25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 MRPL11Q9Y3B7 192 aaKnown RBP25.33■■□□□ 1.65
SMARCC2-210ENST00000550519 GH1P01241 217 aa25.32■■□□□ 1.64
SMARCC2-210ENST00000550519 MMP3P08254 477 aa25.32■■□□□ 1.64
SMARCC2-210ENST00000550519 ACTN1P12814 892 aa25.32■■□□□ 1.64
SMARCC2-210ENST00000550519 BFSP2Q13515 415 aa25.32■■□□□ 1.64
SMARCC2-210ENST00000550519 STXBP2Q15833 593 aa25.32■■□□□ 1.64
SMARCC2-210ENST00000550519 EXOC6Q8TAG9 804 aa25.32■■□□□ 1.64
SMARCC2-210ENST00000550519 CNNM2Q9H8M5 875 aa25.32■■□□□ 1.64
SMARCC2-210ENST00000550519 THEGQ9P2T0 379 aa25.32■■□□□ 1.64
SMARCC2-210ENST00000550519 CCDC85BQ15834 202 aaPredicted RBP25.31■■□□□ 1.64
SMARCC2-210ENST00000550519 SESTD1Q86VW0 696 aa25.31■■□□□ 1.64
SMARCC2-210ENST00000550519 KAT2BQ92831 832 aa25.31■■□□□ 1.64
SMARCC2-210ENST00000550519 VAT1LQ9HCJ6 419 aa25.31■■□□□ 1.64
SMARCC2-210ENST00000550519 GBF1Q92538 1859 aa25.31■■□□□ 1.64
SMARCC2-210ENST00000550519 DHX16O60231 1041 aaKnown RBP25.3■■□□□ 1.64
SMARCC2-210ENST00000550519 TMEM67Q5HYA8 995 aa25.3■■□□□ 1.64
SMARCC2-210ENST00000550519 PHOSPHO2Q8TCD6 241 aa25.3■■□□□ 1.64
SMARCC2-210ENST00000550519 CTAGE1Q96RT6 745 aa25.3■■□□□ 1.64
SMARCC2-210ENST00000550519 UBAC1Q9BSL1 405 aa25.3■■□□□ 1.64
SMARCC2-210ENST00000550519 IL25Q9H293 177 aa25.3■■□□□ 1.64
SMARCC2-210ENST00000550519 NOD1Q9Y239 953 aa25.3■■□□□ 1.64
SMARCC2-210ENST00000550519 OPLAHO14841 1288 aa25.29■■□□□ 1.64
SMARCC2-210ENST00000550519 GHRHRQ02643 423 aa25.29■■□□□ 1.64
SMARCC2-210ENST00000550519 PTGISQ16647 500 aa25.29■■□□□ 1.64
SMARCC2-210ENST00000550519 ARHGEF16Q5VV41 709 aa25.29■■□□□ 1.64
SMARCC2-210ENST00000550519 STAG2Q8N3U4 1231 aa25.29■■□□□ 1.64
SMARCC2-210ENST00000550519 ASB2Q96Q27 587 aa25.29■■□□□ 1.64
SMARCC2-210ENST00000550519 SLC9A7Q96T83 725 aa25.29■■□□□ 1.64
SMARCC2-210ENST00000550519 DDX41Q9UJV9 622 aaKnown RBP25.29■■□□□ 1.64
SMARCC2-210ENST00000550519 EIF3JO75822 258 aaKnown RBP25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 NR3C2P08235 984 aa25.28■■□□□ 1.64
SMARCC2-210ENST00000550519 EIF2AK2P19525 551 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms