RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	FXR2	P51116	673 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	LRMP	Q12912	555 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	PRAMEF18	Q5VWM3	479 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	MOXD1	Q6UVY6	613 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	USP17L1	Q7RTZ2	530 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	PPFIBP1	Q86W92	1011 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	DCAF4	Q8WV16	495 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	DYNLL2	Q96FJ2	89 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	CEP95	Q96GE4	821 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	CALML4	Q96GE6	196 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	EPSTI1	Q96J88	318 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	KANSL2	Q9H9L4	492 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	USP40	Q9NVE5	1235 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	NYAP2	Q9P242	653 aa		13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	LIMA1	Q9UHB6	759 aa	Known RBP	13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	TTF2	Q9UNY4	1162 aa	Known RBP	13.28	□□□□□ -0.28
LETMD1-223	ENST00000550442	PVALEF	A0A1B0GWK0	134 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	PSMA7	O14818	248 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	ENTPD3	O75355	529 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	RHOBTB3	O94955	611 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	PDHB	P11177	359 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	BMP6	P22004	513 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	PAK1	Q13153	545 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	PSMD2	Q13200	908 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	ARHGEF6	Q15052	776 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	STAG2	Q8N3U4	1231 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	PDILT	Q8N807	584 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	RETREG2	Q8NC44	543 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	SHISA4	Q96DD7	197 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	THAP9	Q9H5L6	903 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	SCAF8	Q9UPN6	1271 aa	Known RBP	13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	ABCB11	O95342	1321 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	PHLPP2	Q6ZVD8	1323 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	SYNRG	Q9UMZ2	1314 aa		13.27	□□□□□ -0.29
LETMD1-223	ENST00000550442	PPP1R3G	B7ZBB8	358 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	CYTH3	O43739	400 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	RPN1	P04843	607 aa	Known RBP	13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	RANBP2	P49792	3224 aa	Known RBP	13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	USP11	P51784	963 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	ADCY7	P51828	1080 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	SP3	Q02447	781 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	GRIN1	Q05586	938 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	ZNF543	Q08ER8	600 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	PRKG1	Q13976	671 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	PSME4	Q14997	1843 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	EARS2	Q5JPH6	523 aa	Known RBP	13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	ARMCX5	Q6P1M9	558 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	ERCC4	Q92889	916 aa	Predicted RBP	13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	MTMR8	Q96EF0	704 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	BAG1	Q99933	345 aa	Predicted RBP	13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	C7orf25	Q9BPX7	421 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	NUP58	Q9BVL2	599 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	RIC8A	Q9NPQ8	531 aa		13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442	ADD3	Q9UEY8	706 aa	Known RBP	13.26	□□□□□ -0.29
LETMD1-223	ENST00000550442		A0A1W2PQC6	194 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	KIF20A	O95235	890 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	FOS	P01100	380 aa	Predicted RBP	13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	ETF1	P62495	437 aa	Known RBP	13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	SPECC1	Q5M775	1068 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	TMTC1	Q8IUR5	882 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	IGSF22	Q8N9C0	903 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	RASSF8	Q8NHQ8	419 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	CUL5	Q93034	780 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	SLC10A4	Q96EP9	437 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	NT5C3A	Q9H0P0	336 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	SAP30BP	Q9UHR5	308 aa	Known RBP	13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442	MYH1	P12882	1939 aa		13.25	□□□□□ -0.29
LETMD1-223	ENST00000550442		A0A1W2PPC1	479 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	ZBTB5	O15062	677 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	MYC	P01106	439 aa	Predicted RBP	13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	ZBTB48	P10074	688 aa	Predicted RBP	13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	ATP1A3	P13637	1013 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	FECH	P22830	423 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	AFM	P43652	599 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	AP3B2	Q13367	1082 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	FKBP1C	Q5VVH2	108 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	TMEM179	Q6ZVK1	233 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	USP49	Q70CQ1	688 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	CABP7	Q86V35	215 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	C16orf45	Q96MC5	204 aa	Predicted RBP	13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	FEZ1	Q99689	392 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	HTATIP2	Q9BUP3	242 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	TRIM34	Q9BYJ4	488 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	L2HGDH	Q9H9P8	463 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	MYO1A	Q9UBC5	1043 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	NR2E3	Q9Y5X4	410 aa		13.24	□□□□□ -0.29
LETMD1-223	ENST00000550442	ATRNL1	Q5VV63	1379 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	KDM3A	Q9Y4C1	1321 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	SMIM22	K7EJ46	135 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	RIOK3	O14730	519 aa	Known RBP	13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	TBX3	O15119	743 aa		13.23	□□□□□ -0.29
LETMD1-223	ENST00000550442	PRR29	P0C7W0	189 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms