RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 KHSRPQ92945 711 aaKnown RBP eCLIP17.74■□□□□ 0.43
SVOP-203ENST00000550436 FTOQ9C0B1 505 aaKnown RBP eCLIP17.74■□□□□ 0.43
SVOP-203ENST00000550436 LCHNA4D1U4 455 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 PFKMP08237 780 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 POU3F3P20264 500 aaPredicted RBP17.73■□□□□ 0.43
SVOP-203ENST00000550436 CPT1AP50416 773 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 RPS6P62753 249 aaKnown RBP17.73■□□□□ 0.43
SVOP-203ENST00000550436 GRB10Q13322 594 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 GPNMBQ14956 572 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 TCTN1Q2MV58 587 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 LRRFIP1Q32MZ4 808 aaKnown RBP17.73■□□□□ 0.43
SVOP-203ENST00000550436 HERC6Q8IVU3 1022 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 CTAGE1Q96RT6 745 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 CPVLQ9H3G5 476 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 GPHNQ9NQX3 736 aaPredicted RBP17.73■□□□□ 0.43
SVOP-203ENST00000550436 TOMM22Q9NS69 142 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 ANAPC4Q9UJX5 808 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 XIRP2A4UGR9 3374 aa17.73■□□□□ 0.43
SVOP-203ENST00000550436 COL4A4P53420 1690 aaPredicted RBP17.72■□□□□ 0.43
SVOP-203ENST00000550436 GTPBP6O43824 516 aaPredicted RBP17.72■□□□□ 0.43
SVOP-203ENST00000550436 TLL1O43897 1013 aa17.72■□□□□ 0.43
SVOP-203ENST00000550436 ORC4O43929 436 aa17.72■□□□□ 0.43
SVOP-203ENST00000550436 LPXNO60711 386 aa17.72■□□□□ 0.43
SVOP-203ENST00000550436 PDE4DQ08499 809 aa17.72■□□□□ 0.43
SVOP-203ENST00000550436 RNF207Q6ZRF8 634 aa17.72■□□□□ 0.43
SVOP-203ENST00000550436 TBC1D5Q92609 795 aa17.72■□□□□ 0.43
SVOP-203ENST00000550436 SLC9A7Q96T83 725 aa17.72■□□□□ 0.43
SVOP-203ENST00000550436 A6NJR5 290 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 FGRP09769 529 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 TXNP10599 105 aaKnown RBP17.71■□□□□ 0.43
SVOP-203ENST00000550436 TOP1P11387 765 aaKnown RBP17.71■□□□□ 0.43
SVOP-203ENST00000550436 ACTN1P12814 892 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 EDNRBP24530 442 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 PDE1AP54750 535 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 PPP2R5BQ15173 497 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 RETREG2Q8NC44 543 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 FAM122AQ96E09 287 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 LRFN3Q9BTN0 628 aa17.71■□□□□ 0.43
SVOP-203ENST00000550436 PDHBP11177 359 aa17.7■□□□□ 0.42
SVOP-203ENST00000550436 HAND2P61296 217 aa17.7■□□□□ 0.42
SVOP-203ENST00000550436 NUCB1Q02818 461 aa17.7■□□□□ 0.42
SVOP-203ENST00000550436 AAK1Q2M2I8 961 aa17.7■□□□□ 0.42
SVOP-203ENST00000550436 NFRKBQ6P4R8 1299 aa17.7■□□□□ 0.42
SVOP-203ENST00000550436 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
SVOP-203ENST00000550436 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
SVOP-203ENST00000550436 PITPNM1O00562 1244 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 FGAP02671 866 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 GOLGA8HP0CJ92 632 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 RFC2P35250 354 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 DEFB103AP81534 67 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 ZNF543Q08ER8 600 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 PTGISQ16647 500 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 USH1GQ495M9 461 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 GDF6Q6KF10 455 aaPredicted RBP17.69■□□□□ 0.42
SVOP-203ENST00000550436 PHOSPHO2Q8TCD6 241 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 GDPD5Q8WTR4 605 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 SCFD2Q8WU76 684 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 AFG1LQ8WV93 481 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 DHX38Q92620 1227 aaKnown RBP17.69■□□□□ 0.42
SVOP-203ENST00000550436 C1QTNF1Q9BXJ1 281 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 CD320Q9NPF0 282 aa17.69■□□□□ 0.42
SVOP-203ENST00000550436 A0A0D9SFI3 127 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 ALX1Q15699 326 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 LY6KQ17RY6 165 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 CCDC62Q6P9F0 684 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 CHST3Q7LGC8 479 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 KAT2BQ92831 832 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 UBA5Q9GZZ9 404 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 COL20A1Q9P218 1284 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 MTUS1Q9ULD2 1270 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 NOD1Q9Y239 953 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 MYH7BA7E2Y1 1941 aa17.68■□□□□ 0.42
SVOP-203ENST00000550436 KIAA1217Q5T5P2 1943 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 LOC102724159A0A0B4J2E5 919 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 FAM86C2PA6NEL3 165 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 NKRFO15226 690 aaKnown RBP eCLIP17.67■□□□□ 0.42
SVOP-203ENST00000550436 WDR5P61964 334 aaKnown RBP17.67■□□□□ 0.42
SVOP-203ENST00000550436 PTPN11Q06124 597 aaPredicted RBP17.67■□□□□ 0.42
SVOP-203ENST00000550436 BFSP2Q13515 415 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 PWP2Q15269 919 aaKnown RBP17.67■□□□□ 0.42
SVOP-203ENST00000550436 BRDTQ58F21 947 aaPredicted RBP17.67■□□□□ 0.42
SVOP-203ENST00000550436 SEPT14Q6ZU15 432 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 ZNF589Q86UQ0 364 aaPredicted RBP17.67■□□□□ 0.42
SVOP-203ENST00000550436 HLA-CQ95604 372 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 TAAR1Q96RJ0 339 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 ZKSCAN3Q9BRR0 538 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 C11orf16Q9NQ32 467 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 TCP11L1Q9NUJ3 509 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 COG5Q9UP83 839 aa17.67■□□□□ 0.42
SVOP-203ENST00000550436 KIF28PB7ZC32 967 aa17.66■□□□□ 0.42
SVOP-203ENST00000550436 KPNA6O60684 536 aa17.66■□□□□ 0.42
SVOP-203ENST00000550436 NBNO60934 754 aa17.66■□□□□ 0.42
SVOP-203ENST00000550436 MMP3P08254 477 aa17.66■□□□□ 0.42
SVOP-203ENST00000550436 ARHGAP1Q07960 439 aa17.66■□□□□ 0.42
SVOP-203ENST00000550436 TBC1D10CQ8IV04 446 aa17.66■□□□□ 0.42
SVOP-203ENST00000550436 PLEKHM2Q8IWE5 1019 aa17.66■□□□□ 0.42
SVOP-203ENST00000550436 WNT8BQ93098 351 aa17.66■□□□□ 0.42
SVOP-203ENST00000550436 SNHG28P0DPA3 235 aa17.65■□□□□ 0.42
SVOP-203ENST00000550436 KCNJ6P48051 423 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms