RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 SMARCA1P28370 1054 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 FGD1P98174 961 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 LRRC41Q15345 812 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 UBE2SQ16763 222 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 NOL8Q76FK4 1167 aaKnown RBP12.97□□□□□ -0.33
RAB5B-208ENST00000550283 MSL3Q8N5Y2 521 aaKnown RBP12.97□□□□□ -0.33
RAB5B-208ENST00000550283 COPS5Q92905 334 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 LZTS2Q9BRK4 669 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 ABHD16BQ9H3Z7 469 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 CNPY2Q9Y2B0 182 aa12.97□□□□□ -0.33
RAB5B-208ENST00000550283 ASB14A6NK59 587 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 STXBP3O00186 592 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 AKR1A1P14550 325 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 GNAQP50148 359 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 ANAPC15P60006 121 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 BEX3Q00994 111 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 CCSAPQ6IQ19 270 aaPredicted RBP12.96□□□□□ -0.33
RAB5B-208ENST00000550283 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 FCHSD1Q86WN1 690 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 AIFM3Q96NN9 605 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 RMDN3Q96TC7 470 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 BCAS3Q9H6U6 928 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 PXMP2Q9NR77 195 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 NRBP1Q9UHY1 535 aa12.96□□□□□ -0.33
RAB5B-208ENST00000550283 GNEQ9Y223 722 aaKnown RBP12.96□□□□□ -0.33
RAB5B-208ENST00000550283 CTDNEP1O95476 244 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 RCAN1P53805 252 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 SCRN1Q12765 414 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 LRRC26Q2I0M4 334 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 NECAB1Q8N987 351 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 KLHDC9Q8NEP7 349 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 PGBD1Q96JS3 809 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 PDCD2LQ9BRP1 358 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 RBM28Q9NW13 759 aaKnown RBP12.95□□□□□ -0.34
RAB5B-208ENST00000550283 TMEM260Q9NX78 707 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 PNMA2Q9UL42 364 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 FAM184BQ9ULE4 1060 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 TELO2Q9Y4R8 837 aa12.95□□□□□ -0.34
RAB5B-208ENST00000550283 RBM47A0AV96 593 aaKnown RBP12.94□□□□□ -0.34
RAB5B-208ENST00000550283 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
RAB5B-208ENST00000550283 POLR2MP0CAP2 368 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 RARBP10826 455 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 FXR1P51114 621 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAB5B-208ENST00000550283 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
RAB5B-208ENST00000550283 TNFAIP2Q03169 654 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 PGM5Q15124 567 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 ME3Q16798 604 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 MCF2L2Q86YR7 1114 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 DNERQ8NFT8 737 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 PPP1R13LQ8WUF5 828 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 UPF3AQ9H1J1 476 aaKnown RBP12.94□□□□□ -0.34
RAB5B-208ENST00000550283 C11orf49Q9H6J7 331 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 VTA1Q9NP79 307 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 GJB4Q9NTQ9 266 aa12.94□□□□□ -0.34
RAB5B-208ENST00000550283 ADD3Q9UEY8 706 aaKnown RBP12.94□□□□□ -0.34
RAB5B-208ENST00000550283 FRMPD4Q14CM0 1322 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 DNM1LO00429 736 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 SORBS3O60504 671 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 MSCO60682 206 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 DUSP11O75319 330 aaKnown RBP12.93□□□□□ -0.34
RAB5B-208ENST00000550283 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
RAB5B-208ENST00000550283 NR3C2P08235 984 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 NEK4P51957 841 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 ATN1P54259 1190 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-208ENST00000550283 PDE4DQ08499 809 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 SEMA3FQ13275 785 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 ARHGEF16Q5VV41 709 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 CCDC62Q6P9F0 684 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 NECAB2Q7Z6G3 386 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 NSUN6Q8TEA1 469 aaKnown RBP12.93□□□□□ -0.34
RAB5B-208ENST00000550283 ZNF274Q96GC6 653 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-208ENST00000550283 SLC26A6Q9BXS9 759 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 WDR11Q9BZH6 1224 aa12.93□□□□□ -0.34
RAB5B-208ENST00000550283 SENP6Q9GZR1 1112 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-208ENST00000550283 ALDH8A1Q9H2A2 487 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-208ENST00000550283 SEC63Q9UGP8 760 aaKnown RBP12.93□□□□□ -0.34
RAB5B-208ENST00000550283 DYNC1LI2O43237 492 aaPredicted RBP12.92□□□□□ -0.34
RAB5B-208ENST00000550283 PRPF3O43395 683 aaKnown RBP12.92□□□□□ -0.34
RAB5B-208ENST00000550283 EDIL3O43854 480 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 MYCLP12524 364 aaPredicted RBP12.92□□□□□ -0.34
RAB5B-208ENST00000550283 IFNAR1P17181 557 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 GJA9P57773 515 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 SP2Q02086 613 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 KCNA10Q16322 511 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 PFKFB3Q16875 520 aaPredicted RBP12.92□□□□□ -0.34
RAB5B-208ENST00000550283 LY6KQ17RY6 165 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 SEPT14Q6ZU15 432 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 VSIG10LQ86VR7 867 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 C22orf23Q9BZE7 217 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 PSTPIP2Q9H939 334 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 BARHL2Q9NY43 387 aa12.92□□□□□ -0.34
RAB5B-208ENST00000550283 GRIN2DO15399 1336 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 H0YGN5 161 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 PIK3CDO00329 1044 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 PFKFB2O60825 505 aa12.91□□□□□ -0.34
RAB5B-208ENST00000550283 C6orf222P0C671 652 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms