RNA–Protein interactions for RNA: ENST00000549523.5

USP15-215, Transcript of ubiquitin specific peptidase 15, human

TSL 5

Gene USP15, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP15-215	ENST00000549523	VPS13A	Q96RL7	3174 aa		13.86	□□□□□ -0.19
USP15-215	ENST00000549523	MYH4	Q9Y623	1939 aa		13.86	□□□□□ -0.19
USP15-215	ENST00000549523	PLA2G6	O60733	806 aa		13.85	□□□□□ -0.19
USP15-215	ENST00000549523	TCF15	Q12870	199 aa		13.85	□□□□□ -0.19
USP15-215	ENST00000549523	IER5L	Q5T953	404 aa		13.85	□□□□□ -0.19
USP15-215	ENST00000549523	CNKSR3	Q6P9H4	555 aa		13.85	□□□□□ -0.19
USP15-215	ENST00000549523	GIMAP6	Q6P9H5	292 aa		13.85	□□□□□ -0.19
USP15-215	ENST00000549523	FAM160B2	Q86V87	743 aa		13.85	□□□□□ -0.19
USP15-215	ENST00000549523	CLASRP	Q8N2M8	674 aa	Known RBP	13.85	□□□□□ -0.19
USP15-215	ENST00000549523	COPS5	Q92905	334 aa		13.85	□□□□□ -0.19
USP15-215	ENST00000549523	ALG13	Q9NP73	1137 aa	Known RBP	13.85	□□□□□ -0.19
USP15-215	ENST00000549523	PRR12	Q9ULL5	1215 aa		13.85	□□□□□ -0.19
USP15-215	ENST00000549523	FAM50B	Q9Y247	325 aa		13.85	□□□□□ -0.19
USP15-215	ENST00000549523	MINDY4B	A8MYZ0	360 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	IFIT2	P09913	472 aa	Known RBP	13.84	□□□□□ -0.19
USP15-215	ENST00000549523	SELP	P16109	830 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	EDNRB	P24530	442 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	IRS1	P35568	1242 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	BAAT	Q14032	418 aa	Predicted RBP	13.84	□□□□□ -0.19
USP15-215	ENST00000549523	MBTPS1	Q14703	1052 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	PTGIS	Q16647	500 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	GDF6	Q6KF10	455 aa	Predicted RBP	13.84	□□□□□ -0.19
USP15-215	ENST00000549523	NSMF	Q6X4W1	530 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	LRRC8D	Q7L1W4	858 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	SESTD1	Q86VW0	696 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	ADHFE1	Q8IWW8	467 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	SIRT2	Q8IXJ6	389 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	NEDD1	Q8NHV4	660 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	CAGE1	Q8TC20	777 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	SP7	Q8TDD2	431 aa	Predicted RBP	13.84	□□□□□ -0.19
USP15-215	ENST00000549523	MRPL38	Q96DV4	380 aa	Known RBP	13.84	□□□□□ -0.19
USP15-215	ENST00000549523	KIF1BP	Q96EK5	621 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	ZBED2	Q9BTP6	218 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	UPF3B	Q9BZI7	483 aa	Known RBP	13.84	□□□□□ -0.19
USP15-215	ENST00000549523	KMT2E	Q8IZD2	1858 aa		13.84	□□□□□ -0.19
USP15-215	ENST00000549523	NFIB	O00712	420 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	ARIH2	O95376	493 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	MCC	P23508	829 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	LTBR	P36941	435 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	HSP90AB4P	Q58FF6	505 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.83	□□□□□ -0.2
USP15-215	ENST00000549523	SLC30A10	Q6XR72	485 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	KCTD1	Q719H9	257 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	ERMP1	Q7Z2K6	904 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	CHURC1	Q8WUH1	139 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	KAT2B	Q92831	832 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	WNT8B	Q93098	351 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	OSBP2	Q969R2	916 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	CHMP4C	Q96CF2	233 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	PABPC5	Q96DU9	382 aa	Known RBP	13.83	□□□□□ -0.2
USP15-215	ENST00000549523	GPHN	Q9NQX3	736 aa	Predicted RBP	13.83	□□□□□ -0.2
USP15-215	ENST00000549523	EPG5	Q9HCE0	2579 aa		13.83	□□□□□ -0.2
USP15-215	ENST00000549523	LOC102724159	A0A0B4J2E5	919 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	ICAM1	P05362	532 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	SLC1A4	P43007	532 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	HTRA4	P83105	476 aa	Predicted RBP	13.82	□□□□□ -0.2
USP15-215	ENST00000549523	PWP2	Q15269	919 aa	Known RBP	13.82	□□□□□ -0.2
USP15-215	ENST00000549523	TRIM71	Q2Q1W2	868 aa	Known RBP	13.82	□□□□□ -0.2
USP15-215	ENST00000549523	TCEAL5	Q5H9L2	206 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	FAM117B	Q6P1L5	589 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	2e-16	■■■■■ 52.7
USP15-215	ENST00000549523	BMP8A	Q7Z5Y6	402 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	FBXO22	Q8NEZ5	403 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	FAM86C1	Q9NVL1	165 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	MUTYH	Q9UIF7	546 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	CCPG1	Q9ULG6	757 aa		13.82	□□□□□ -0.2
USP15-215	ENST00000549523	KPNA6	O60684	536 aa		13.81	□□□□□ -0.2
USP15-215	ENST00000549523	CKB	P12277	381 aa		13.81	□□□□□ -0.2
USP15-215	ENST00000549523	PPP2R5B	Q15173	497 aa		13.81	□□□□□ -0.2
USP15-215	ENST00000549523	PKN1	Q16512	942 aa		13.81	□□□□□ -0.2
USP15-215	ENST00000549523	FTSJ3	Q8IY81	847 aa	Known RBP	13.81	□□□□□ -0.2
USP15-215	ENST00000549523	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.81	□□□□□ -0.2
USP15-215	ENST00000549523	CLEC4D	Q8WXI8	215 aa		13.81	□□□□□ -0.2
USP15-215	ENST00000549523	RANBP17	Q9H2T7	1088 aa	Known RBP	13.81	□□□□□ -0.2
USP15-215	ENST00000549523	ADD3	Q9UEY8	706 aa	Known RBP	13.81	□□□□□ -0.2
USP15-215	ENST00000549523	NOD1	Q9Y239	953 aa		13.81	□□□□□ -0.2
USP15-215	ENST00000549523	MYH7	P12883	1935 aa		13.81	□□□□□ -0.2
USP15-215	ENST00000549523	PLXNA3	P51805	1871 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	TRIP12	Q14669	1992 aa	Predicted RBP	13.8	□□□□□ -0.2
USP15-215	ENST00000549523	GVINP1	Q7Z2Y8	2422 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	COL4A6	Q14031	1691 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.8	□□□□□ -0.2
USP15-215	ENST00000549523	NKRF	O15226	690 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
USP15-215	ENST00000549523	EPC2	Q52LR7	807 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	TIGD5	Q53EQ6	642 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	RCSD1	Q6JBY9	416 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	CCDC62	Q6P9F0	684 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	SUGP1	Q8IWZ8	645 aa	Known RBP	13.8	□□□□□ -0.2
USP15-215	ENST00000549523	CCDC155	Q8N6L0	562 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	BANK1	Q8NDB2	785 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	SCFD2	Q8WU76	684 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	EDA	Q92838	391 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	IL17RB	Q9NRM6	502 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	WDR87	Q6ZQQ6	2873 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	DNAH14	Q0VDD8	3507 aa		13.8	□□□□□ -0.2
USP15-215	ENST00000549523	CACNA1G	O43497	2377 aa		13.79	□□□□□ -0.2
USP15-215	ENST00000549523		H3BNC9	293 aa		13.79	□□□□□ -0.2
USP15-215	ENST00000549523		M0R2C6	588 aa		13.79	□□□□□ -0.2
USP15-215	ENST00000549523	PARN	O95453	639 aa	Known RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms