RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 IFIT1BQ5T764 474 aaKnown RBP20.31■□□□□ 0.84
CHMP1A-205ENST00000548650 CYB5R4Q7L1T6 521 aa20.31■□□□□ 0.84
CHMP1A-205ENST00000548650 COPS5Q92905 334 aa20.31■□□□□ 0.84
CHMP1A-205ENST00000548650 DHX16O60231 1041 aaKnown RBP20.3■□□□□ 0.84
CHMP1A-205ENST00000548650 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.3■□□□□ 0.84
CHMP1A-205ENST00000548650 STAG2Q8N3U4 1231 aa20.3■□□□□ 0.84
CHMP1A-205ENST00000548650 MAFAQ8NHW3 353 aaPredicted RBP20.3■□□□□ 0.84
CHMP1A-205ENST00000548650 MTG1Q9BT17 334 aaPredicted RBP20.3■□□□□ 0.84
CHMP1A-205ENST00000548650 TRMT13Q9NUP7 481 aaKnown RBP20.3■□□□□ 0.84
CHMP1A-205ENST00000548650 A6NJR5 290 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 GRXCR1A8MXD5 290 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 B4DLN1 442 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 OPLAHO14841 1288 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 CYP21A2P08686 494 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 TXNP10599 105 aaKnown RBP20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 FOSL2P15408 326 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 CHMLP26374 656 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 MRPL12P52815 198 aaKnown RBP20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 CCL23P55773 120 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 IRX6P78412 446 aaPredicted RBP20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 TTLL4Q14679 1199 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 FBXO11Q86XK2 927 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 HERVK_113Q902F9 699 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 TIFAQ96CG3 184 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 TAAR1Q96RJ0 339 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 PBX4Q9BYU1 374 aa20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 CXXC1Q9P0U4 656 aaPredicted RBP20.29■□□□□ 0.84
CHMP1A-205ENST00000548650 PPP1R11O60927 126 aaPredicted RBP20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 PBX2P40425 430 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 PTH1RQ03431 593 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 GRIN2CQ14957 1233 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 BRDTQ58F21 947 aaPredicted RBP20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 CCDC62Q6P9F0 684 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 MCF2L2Q86YR7 1114 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 NSUN6Q8TEA1 469 aaKnown RBP20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 VWCEQ96DN2 955 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 MTMR8Q96EF0 704 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 MAD2L2Q9UI95 211 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 MRPL11Q9Y3B7 192 aaKnown RBP20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 TAF6LQ9Y6J9 622 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 BAZ2BQ9UIF8 2168 aaKnown RBP20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 CHD9Q3L8U1 2897 aa20.28■□□□□ 0.84
CHMP1A-205ENST00000548650 CYP2C9P11712 490 aa20.27■□□□□ 0.84
CHMP1A-205ENST00000548650 GHRHRQ02643 423 aa20.27■□□□□ 0.84
CHMP1A-205ENST00000548650 SLC35G1Q2M3R5 365 aa20.27■□□□□ 0.84
CHMP1A-205ENST00000548650 RUFY2Q8WXA3 655 aa20.27■□□□□ 0.84
CHMP1A-205ENST00000548650 RMDN3Q96TC7 470 aa20.27■□□□□ 0.84
CHMP1A-205ENST00000548650 ZNF576Q9H609 170 aa20.27■□□□□ 0.84
CHMP1A-205ENST00000548650 VAT1LQ9HCJ6 419 aa20.27■□□□□ 0.84
CHMP1A-205ENST00000548650 GPHNQ9NQX3 736 aaPredicted RBP20.27■□□□□ 0.84
CHMP1A-205ENST00000548650 PRUNE2Q8WUY3 3088 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 PALM3A6NDB9 673 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 KLRF2D3W0D1 207 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 SUPT20HL2P0C7V6 817 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 HSD17B4P51659 736 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 ARHGAP1Q07960 439 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 NBPF20Q3BBV1 942 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 NFRKBQ6P4R8 1299 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 PPP1R13LQ8WUF5 828 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 SCLYQ96I15 445 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 IWS1Q96ST2 819 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 AMNQ9BXJ7 453 aa20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 U3KPZ7 1027 aaPredicted RBP20.26■□□□□ 0.83
CHMP1A-205ENST00000548650 MYH7BA7E2Y1 1941 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 MYO9BQ13459 2157 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 SGSM2O43147 1006 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 KPNA6O60684 536 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 FGBP02675 491 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 MMP3P08254 477 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 EIF2AK2P19525 551 aaKnown RBP20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 TRDNQ13061 729 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 GRM4Q14833 912 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 FAM47CQ5HY64 1035 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 SEPT14Q6ZU15 432 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 STOX1Q6ZVD7 989 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 OTOP2Q7RTS6 562 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 MTIF3Q9H2K0 278 aaKnown RBP20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 SENP2Q9HC62 589 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 PXMP2Q9NR77 195 aa20.25■□□□□ 0.83
CHMP1A-205ENST00000548650 ZBTB5O15062 677 aa20.24■□□□□ 0.83
CHMP1A-205ENST00000548650 CFBP00751 764 aa20.24■□□□□ 0.83
CHMP1A-205ENST00000548650 STXBP2Q15833 593 aa20.24■□□□□ 0.83
CHMP1A-205ENST00000548650 LY6KQ17RY6 165 aa20.24■□□□□ 0.83
CHMP1A-205ENST00000548650 AFG1LQ8WV93 481 aa20.24■□□□□ 0.83
CHMP1A-205ENST00000548650 TRIP12Q14669 1992 aaPredicted RBP20.23■□□□□ 0.83
CHMP1A-205ENST00000548650 TET1Q8NFU7 2136 aa20.23■□□□□ 0.83
CHMP1A-205ENST00000548650 GH1P01241 217 aa20.23■□□□□ 0.83
CHMP1A-205ENST00000548650 PTPN11Q06124 597 aaPredicted RBP20.23■□□□□ 0.83
CHMP1A-205ENST00000548650 RAB30Q15771 203 aa20.23■□□□□ 0.83
CHMP1A-205ENST00000548650 ARHGEF16Q5VV41 709 aa20.23■□□□□ 0.83
CHMP1A-205ENST00000548650 RALYLQ86SE5 291 aaKnown RBP20.23■□□□□ 0.83
CHMP1A-205ENST00000548650 PTPRSQ13332 1948 aa20.22■□□□□ 0.83
CHMP1A-205ENST00000548650 E7EWF7 191 aa20.22■□□□□ 0.83
CHMP1A-205ENST00000548650 IFIT3O14879 490 aaKnown RBP20.22■□□□□ 0.83
CHMP1A-205ENST00000548650 NR3C2P08235 984 aa20.22■□□□□ 0.83
CHMP1A-205ENST00000548650 PFKMP08237 780 aa20.22■□□□□ 0.83
CHMP1A-205ENST00000548650 ANTXR2P58335 489 aa20.22■□□□□ 0.83
CHMP1A-205ENST00000548650 TROAPQ12815 778 aa20.22■□□□□ 0.83
CHMP1A-205ENST00000548650 COL25A1Q9BXS0 654 aaPredicted RBP20.22■□□□□ 0.83
CHMP1A-205ENST00000548650 RIOX1Q9H6W3 641 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms