RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 NMIQ13287 307 aaPredicted RBP14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 ALX1Q15699 326 aa14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 BRDTQ58F21 947 aaPredicted RBP14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 CHST3Q7LGC8 479 aa14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 ARNTL2Q8WYA1 636 aa14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 RILPL2Q969X0 211 aa14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 TANC1Q9C0D5 1861 aa14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 EPOPA6NHQ4 379 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 ARHGEF15O94989 841 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 ARIH2O95376 493 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 FGRP09769 529 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 IQCF3P0C7M6 154 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 PDE1AP54750 535 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 ZNF543Q08ER8 600 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 MFSD6Q6ZSS7 791 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 SEPT14Q6ZU15 432 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 TMCO2Q7Z6W1 182 aaPredicted RBP14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 ZNF589Q86UQ0 364 aaPredicted RBP14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 VAT1LQ9HCJ6 419 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 TCP11L1Q9NUJ3 509 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 SALL3Q9BXA9 1300 aa14.04□□□□□ -0.16
TRAFD1-205ENST00000548277 TTC28Q96AY4 2481 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 GTPBP6O43824 516 aaPredicted RBP14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 PFKMP08237 780 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 PTGISQ16647 500 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 LY6KQ17RY6 165 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 SPRED2Q7Z698 418 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 SCFD2Q8WU76 684 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 AFG1LQ8WV93 481 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 TAAR1Q96RJ0 339 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 CRBNQ96SW2 442 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 MPHOSPH6Q99547 160 aaKnown RBP14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 MTCH2Q9Y6C9 303 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 RAD50Q92878 1312 aa14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 BAZ2BQ9UIF8 2168 aaKnown RBP14.03□□□□□ -0.16
TRAFD1-205ENST00000548277 KIF28PB7ZC32 967 aa14.02□□□□□ -0.17
TRAFD1-205ENST00000548277 NKRFO15226 690 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRAFD1-205ENST00000548277 BMP1P13497 986 aa14.02□□□□□ -0.17
TRAFD1-205ENST00000548277 NFRKBQ6P4R8 1299 aa14.02□□□□□ -0.17
TRAFD1-205ENST00000548277 TBC1D10CQ8IV04 446 aa14.02□□□□□ -0.17
TRAFD1-205ENST00000548277 A6NJR5 290 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 B4DLN1 442 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 DHX16O60231 1041 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 SORBS3O60504 671 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 KPNA6O60684 536 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 MRPL12P52815 198 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 RRP1P56182 461 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 TAP1Q03518 808 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 BFSP2Q13515 415 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 GDF6Q6KF10 455 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 B4GALNT3Q6L9W6 998 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 HERC6Q8IVU3 1022 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 DNERQ8NFT8 737 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 TTC14Q96N46 770 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 SLC9A7Q96T83 725 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 ALG1Q9BT22 464 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 LNPKQ9C0E8 428 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 DOCK5Q9H7D0 1870 aa14.01□□□□□ -0.17
TRAFD1-205ENST00000548277 NCOR1O75376 2440 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 NEDD4P46934 1319 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 CCDC171Q6TFL3 1326 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 LOC102724159A0A0B4J2E5 919 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 TLL1O43897 1013 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 EDNRBP24530 442 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 RFC2P35250 354 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 KCNJ6P48051 423 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 PWP2Q15269 919 aaKnown RBP14□□□□□ -0.17
TRAFD1-205ENST00000548277 CDC37Q16543 378 aaPredicted RBP14□□□□□ -0.17
TRAFD1-205ENST00000548277 FAM117BQ6P1L5 589 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 YTHDC1Q96MU7 727 aaKnown RBP14□□□□□ -0.17
TRAFD1-205ENST00000548277 ZBED2Q9BTP6 218 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 COL4A4P53420 1690 aaPredicted RBP14□□□□□ -0.17
TRAFD1-205ENST00000548277 KAT6AQ92794 2004 aa14□□□□□ -0.17
TRAFD1-205ENST00000548277 WDR19Q8NEZ3 1342 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 LCHNA4D1U4 455 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 ZNF213O14771 459 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 KDM4AO75164 1064 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 GH1P01241 217 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 MMP3P08254 477 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 SNHG28P0DPA3 235 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 EIF2AK2P19525 551 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 PTPN11Q06124 597 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 GRB10Q13322 594 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 AAK1Q2M2I8 961 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 ADGRF4Q8IZF3 695 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 PHOSPHO2Q8TCD6 241 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 SYTL5Q8TDW5 730 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 ESR2Q92731 530 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 KAT14Q9H8E8 782 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 HDAC6Q9UBN7 1215 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 PNMA2Q9UL42 364 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 MTUS1Q9ULD2 1270 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 REV3LO60673 3130 aa13.99□□□□□ -0.17
TRAFD1-205ENST00000548277 MUC3AQ02505 3323 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 B4E1Z4 1266 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 CFBP00751 764 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 SDSP20132 328 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms