RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 DNERQ8NFT8 737 aa23.83■■□□□ 1.41
SSH1-207ENST00000547862 SCFD2Q8WU76 684 aa23.83■■□□□ 1.41
SSH1-207ENST00000547862 SEZ6LQ9BYH1 1024 aa23.83■■□□□ 1.41
SSH1-207ENST00000547862 YBX2Q9Y2T7 364 aaKnown RBP23.83■■□□□ 1.41
SSH1-207ENST00000547862 ARIH2O95376 493 aa23.82■■□□□ 1.4
SSH1-207ENST00000547862 TXNP10599 105 aaKnown RBP23.82■■□□□ 1.4
SSH1-207ENST00000547862 EDNRBP24530 442 aa23.82■■□□□ 1.4
SSH1-207ENST00000547862 NBPF20Q3BBV1 942 aa23.82■■□□□ 1.4
SSH1-207ENST00000547862 DGKHQ86XP1 1220 aa23.82■■□□□ 1.4
SSH1-207ENST00000547862 ZSCAN10Q96SZ4 725 aaPredicted RBP23.82■■□□□ 1.4
SSH1-207ENST00000547862 PRDM6Q9NQX0 595 aa23.82■■□□□ 1.4
SSH1-207ENST00000547862 VCANP13611 3396 aa23.82■■□□□ 1.4
SSH1-207ENST00000547862 MYH7BA7E2Y1 1941 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 CHD9Q3L8U1 2897 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 NKRFO15226 690 aaKnown RBP eCLIP23.81■■□□□ 1.4
SSH1-207ENST00000547862 AAMPQ13685 434 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 IMMTQ16891 758 aaKnown RBP23.81■■□□□ 1.4
SSH1-207ENST00000547862 SEPT14Q6ZU15 432 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 ADGRF4Q8IZF3 695 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 ENAHQ8N8S7 591 aaPredicted RBP23.81■■□□□ 1.4
SSH1-207ENST00000547862 TBC1D5Q92609 795 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 OSBPL3Q9H4L5 887 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 VAT1LQ9HCJ6 419 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 SLC4A7Q9Y6M7 1214 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 TRIP12Q14669 1992 aaPredicted RBP23.81■■□□□ 1.4
SSH1-207ENST00000547862 ABCB11O95342 1321 aa23.81■■□□□ 1.4
SSH1-207ENST00000547862 B4DLN1 442 aa23.8■■□□□ 1.4
SSH1-207ENST00000547862 HIP1O00291 1037 aa23.8■■□□□ 1.4
SSH1-207ENST00000547862 SUPT20HL2P0C7V6 817 aa23.8■■□□□ 1.4
SSH1-207ENST00000547862 IGFBP4P22692 258 aa23.8■■□□□ 1.4
SSH1-207ENST00000547862 MRPL12P52815 198 aaKnown RBP23.8■■□□□ 1.4
SSH1-207ENST00000547862 TTLL4Q14679 1199 aa23.8■■□□□ 1.4
SSH1-207ENST00000547862 ASPRV1Q53RT3 343 aa23.8■■□□□ 1.4
SSH1-207ENST00000547862 CCDC178Q5BJE1 867 aa23.8■■□□□ 1.4
SSH1-207ENST00000547862 RPUSD2Q8IZ73 545 aaKnown RBP23.8■■□□□ 1.4
SSH1-207ENST00000547862 SLC28A3Q9HAS3 691 aa23.8■■□□□ 1.4
SSH1-207ENST00000547862 PARP1P09874 1014 aaKnown RBP23.79■■□□□ 1.4
SSH1-207ENST00000547862 MYOGP15173 224 aa23.79■■□□□ 1.4
SSH1-207ENST00000547862 CCDC85BQ15834 202 aaPredicted RBP23.79■■□□□ 1.4
SSH1-207ENST00000547862 QRICH1Q2TAL8 776 aa23.79■■□□□ 1.4
SSH1-207ENST00000547862 CHST3Q7LGC8 479 aa23.79■■□□□ 1.4
SSH1-207ENST00000547862 TAAR1Q96RJ0 339 aa23.79■■□□□ 1.4
SSH1-207ENST00000547862 UBAC1Q9BSL1 405 aa23.79■■□□□ 1.4
SSH1-207ENST00000547862 DSCC1Q9BVC3 393 aa23.79■■□□□ 1.4
SSH1-207ENST00000547862 COL20A1Q9P218 1284 aa23.79■■□□□ 1.4
SSH1-207ENST00000547862 NOD1Q9Y239 953 aa23.79■■□□□ 1.4
SSH1-207ENST00000547862 PPP2R2DQ66LE6 453 aa23.78■■□□□ 1.4
SSH1-207ENST00000547862 SYTL5Q8TDW5 730 aaPredicted RBP23.78■■□□□ 1.4
SSH1-207ENST00000547862 PTPRSQ13332 1948 aa23.77■■□□□ 1.4
SSH1-207ENST00000547862 EIF2AK2P19525 551 aaKnown RBP23.77■■□□□ 1.4
SSH1-207ENST00000547862 LY6KQ17RY6 165 aa23.77■■□□□ 1.4
SSH1-207ENST00000547862 FBXO11Q86XK2 927 aa23.77■■□□□ 1.4
SSH1-207ENST00000547862 MICALL1Q8N3F8 863 aa23.77■■□□□ 1.4
SSH1-207ENST00000547862 AFG1LQ8WV93 481 aa23.77■■□□□ 1.4
SSH1-207ENST00000547862 IL25Q9H293 177 aa23.77■■□□□ 1.4
SSH1-207ENST00000547862 ZSWIM5Q9P217 1185 aa23.77■■□□□ 1.4
SSH1-207ENST00000547862 ATP2A2P16615 1042 aaKnown RBP23.76■■□□□ 1.39
SSH1-207ENST00000547862 ADGRE1Q14246 886 aa23.76■■□□□ 1.39
SSH1-207ENST00000547862 IFIT1BQ5T764 474 aaKnown RBP23.76■■□□□ 1.39
SSH1-207ENST00000547862 TET1Q8NFU7 2136 aa23.76■■□□□ 1.39
SSH1-207ENST00000547862 VWCEQ96DN2 955 aa23.76■■□□□ 1.39
SSH1-207ENST00000547862 RMDN3Q96TC7 470 aa23.76■■□□□ 1.39
SSH1-207ENST00000547862 KRT23Q9C075 422 aa23.76■■□□□ 1.39
SSH1-207ENST00000547862 CTNNA3Q9UI47 895 aa23.76■■□□□ 1.39
SSH1-207ENST00000547862 A6NJR5 290 aa23.75■■□□□ 1.39
SSH1-207ENST00000547862 CFBP00751 764 aa23.75■■□□□ 1.39
SSH1-207ENST00000547862 MMP3P08254 477 aa23.75■■□□□ 1.39
SSH1-207ENST00000547862 ARHGEF16Q5VV41 709 aa23.75■■□□□ 1.39
SSH1-207ENST00000547862 NFRKBQ6P4R8 1299 aa23.75■■□□□ 1.39
SSH1-207ENST00000547862 STAG2Q8N3U4 1231 aa23.75■■□□□ 1.39
SSH1-207ENST00000547862 NSUN6Q8TEA1 469 aaKnown RBP23.75■■□□□ 1.39
SSH1-207ENST00000547862 FTOQ9C0B1 505 aaKnown RBP eCLIP23.75■■□□□ 1.39
SSH1-207ENST00000547862 JMJD4Q9H9V9 463 aa23.75■■□□□ 1.39
SSH1-207ENST00000547862 MRPL11Q9Y3B7 192 aaKnown RBP23.75■■□□□ 1.39
SSH1-207ENST00000547862 SPTBN5Q9NRC6 3674 aaKnown RBP23.75■■□□□ 1.39
SSH1-207ENST00000547862 CHD7Q9P2D1 2997 aa23.75■■□□□ 1.39
SSH1-207ENST00000547862 KPNA6O60684 536 aa23.74■■□□□ 1.39
SSH1-207ENST00000547862 GH1P01241 217 aa23.74■■□□□ 1.39
SSH1-207ENST00000547862 PFKMP08237 780 aa23.74■■□□□ 1.39
SSH1-207ENST00000547862 MCF2L2Q86YR7 1114 aa23.74■■□□□ 1.39
SSH1-207ENST00000547862 RETREG2Q8NC44 543 aa23.74■■□□□ 1.39
SSH1-207ENST00000547862 RGS22Q8NE09 1264 aa23.74■■□□□ 1.39
SSH1-207ENST00000547862 ANKS1AQ92625 1134 aa23.74■■□□□ 1.39
SSH1-207ENST00000547862 CNNM2Q9H8M5 875 aa23.74■■□□□ 1.39
SSH1-207ENST00000547862 COL4A4P53420 1690 aaPredicted RBP23.73■■□□□ 1.39
SSH1-207ENST00000547862 SORBS3O60504 671 aa23.73■■□□□ 1.39
SSH1-207ENST00000547862 ACTN1P12814 892 aa23.73■■□□□ 1.39
SSH1-207ENST00000547862 NT5C2P49902 561 aa23.73■■□□□ 1.39
SSH1-207ENST00000547862 ARHGAP1Q07960 439 aa23.73■■□□□ 1.39
SSH1-207ENST00000547862 STXBP2Q15833 593 aa23.73■■□□□ 1.39
SSH1-207ENST00000547862 TJAP1Q5JTD0 557 aa23.73■■□□□ 1.39
SSH1-207ENST00000547862 CCDC62Q6P9F0 684 aa23.73■■□□□ 1.39
SSH1-207ENST00000547862 CYB5R4Q7L1T6 521 aa23.73■■□□□ 1.39
SSH1-207ENST00000547862 SYMPKQ92797 1274 aaKnown RBP23.73■■□□□ 1.39
SSH1-207ENST00000547862 THEGQ9P2T0 379 aa23.73■■□□□ 1.39
SSH1-207ENST00000547862 BAZ2BQ9UIF8 2168 aaKnown RBP23.72■■□□□ 1.39
SSH1-207ENST00000547862 PTGISQ16647 500 aa23.72■■□□□ 1.39
SSH1-207ENST00000547862 HOMER1Q86YM7 354 aa23.72■■□□□ 1.39
SSH1-207ENST00000547862 CERS4Q9HA82 394 aa23.72■■□□□ 1.39
SSH1-207ENST00000547862 PCDHA11Q9Y5I1 949 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms