RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 PXMP2Q9NR77 195 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 PHF24Q9UPV7 400 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 GNEQ9Y223 722 aaKnown RBP13.66□□□□□ -0.22
RAB5C-204ENST00000547517 CYP46A1Q9Y6A2 500 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 A0A1W2PQ45 241 aaPredicted RBP13.65□□□□□ -0.22
RAB5C-204ENST00000547517 A0A1W2PQY0 241 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 CST5P28325 142 aaPredicted RBP13.65□□□□□ -0.22
RAB5C-204ENST00000547517 CDC27P30260 824 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 RCAN1P53805 252 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 GJA9P57773 515 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 PPP2R5BQ15173 497 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 IQSEC1Q6DN90 963 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 KLHDC9Q8NEP7 349 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 GPKOWQ92917 476 aaPredicted RBP eCLIP13.65□□□□□ -0.22
RAB5C-204ENST00000547517 AGXT2Q9BYV1 514 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 WDR11Q9BZH6 1224 aa13.65□□□□□ -0.22
RAB5C-204ENST00000547517 ZMYND8Q9ULU4 1186 aaPredicted RBP13.65□□□□□ -0.22
RAB5C-204ENST00000547517 NID2Q14112 1375 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 DYNC1LI2O43237 492 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-204ENST00000547517 ACLYP53396 1101 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 RTP1P59025 263 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 BEX3Q00994 111 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 FUT2Q10981 343 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 KCNA10Q16322 511 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 GNASQ5JWF2 1037 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 SEPT14Q6ZU15 432 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 FBXL16Q8N461 479 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 SAMD3Q8N6K7 520 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 SCFD2Q8WU76 684 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 CUL5Q93034 780 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 IWS1Q96ST2 819 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 TSEN34Q9BSV6 310 aaKnown RBP13.64□□□□□ -0.23
RAB5C-204ENST00000547517 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 AP5M1Q9H0R1 490 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 FAM217BQ9NTX9 383 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-204ENST00000547517 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
RAB5C-204ENST00000547517 ATP11BQ9Y2G3 1177 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 DNAH12Q6ZR08 3092 aa13.64□□□□□ -0.23
RAB5C-204ENST00000547517 RBM47A0AV96 593 aaKnown RBP13.63□□□□□ -0.23
RAB5C-204ENST00000547517 MOXD2PA6NHM9 499 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 CTAGE5O15320 804 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 ARIH2O95376 493 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 ASGR1P07306 291 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 NR3C2P08235 984 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 MYCLP12524 364 aaPredicted RBP13.63□□□□□ -0.23
RAB5C-204ENST00000547517 SYN1P17600 705 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 ADD1P35611 737 aaKnown RBP13.63□□□□□ -0.23
RAB5C-204ENST00000547517 TOB2Q14106 344 aaPredicted RBP13.63□□□□□ -0.23
RAB5C-204ENST00000547517 STXBP2Q15833 593 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 FSCN1Q16658 493 aaKnown RBP13.63□□□□□ -0.23
RAB5C-204ENST00000547517 TRIM60Q495X7 471 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 DUSP28Q4G0W2 176 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 WWC2Q6AWC2 1192 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 CCSAPQ6IQ19 270 aaPredicted RBP13.63□□□□□ -0.23
RAB5C-204ENST00000547517 SLC39A5Q6ZMH5 540 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 PCSK9Q8NBP7 692 aaKnown RBP13.63□□□□□ -0.23
RAB5C-204ENST00000547517 OR6J1Q8NGC5 347 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 IL31RAQ8NI17 732 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 SMARCC2Q8TAQ2 1214 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 PDCD2LQ9BRP1 358 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 STARD7Q9NQZ5 370 aa13.63□□□□□ -0.23
RAB5C-204ENST00000547517 CCDC196A0A1B0GTZ2 297 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 EIF5BO60841 1220 aaKnown RBP13.62□□□□□ -0.23
RAB5C-204ENST00000547517 SEC24BO95487 1268 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 TXNP10599 105 aaKnown RBP13.62□□□□□ -0.23
RAB5C-204ENST00000547517 NAPAP54920 295 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 TTLL4Q14679 1199 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 SNX17Q15036 470 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 PGM5Q15124 567 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 USP17L6PQ6QN14 398 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 COPS5Q92905 334 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 GLT1D1Q96MS3 346 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 LARP6Q9BRS8 491 aaKnown RBP13.62□□□□□ -0.23
RAB5C-204ENST00000547517 PDRG1Q9NUG6 133 aa13.62□□□□□ -0.23
RAB5C-204ENST00000547517 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
RAB5C-204ENST00000547517 MEIS2O14770 477 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 PPFIA3O75145 1194 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 PDIA3P30101 505 aaKnown RBP13.61□□□□□ -0.23
RAB5C-204ENST00000547517 CCND2P30279 289 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 ANAPC15P60006 121 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 NKX3-2P78367 333 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
RAB5C-204ENST00000547517 UBE2SQ16763 222 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 CXCL17Q6UXB2 119 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 CHRDL2Q6WN34 429 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 VTI1AQ96AJ9 217 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
RAB5C-204ENST00000547517 PSTPIP2Q9H939 334 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 NCOA5Q9HCD5 579 aaKnown RBP13.61□□□□□ -0.23
RAB5C-204ENST00000547517 Q9Y3F1 56 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 MRVI1Q9Y6F6 885 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 FRMPD4Q14CM0 1322 aa13.61□□□□□ -0.23
RAB5C-204ENST00000547517 STXBP3O00186 592 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 PIK3CDO00329 1044 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 NKRFO15226 690 aaKnown RBP eCLIP13.6□□□□□ -0.23
RAB5C-204ENST00000547517 ZEB2O60315 1214 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 PQBP1O60828 265 aaKnown RBP13.6□□□□□ -0.23
RAB5C-204ENST00000547517 EIF3JO75822 258 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms