RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 XRRA1Q6P2D8 792 aa18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 SLC30A10Q6XR72 485 aa18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 NSUN6Q8TEA1 469 aaKnown RBP18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 SPATA32Q96LK8 384 aa18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 USP28Q96RU2 1077 aa18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 TFIP11Q9UBB9 837 aaKnown RBP18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 ADD3Q9UEY8 706 aaKnown RBP18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 TCHHQ07283 1943 aa18.02■□□□□ 0.47
TRAFD1-203ENST00000547063 RPTORQ8N122 1335 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 LOC102724159A0A0B4J2E5 919 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 POTEB2H3BUK9 544 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 LAD1O00515 517 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 PTMSP20962 102 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 STK38Q15208 465 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 PWP2Q15269 919 aaKnown RBP18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 SF3A1Q15459 793 aaKnown RBP18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 LETM2Q2VYF4 491 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 NOM1Q5C9Z4 860 aaKnown RBP18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 ARHGEF16Q5VV41 709 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 PPP4R3AQ6IN85 833 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 KCNG4Q8TDN1 519 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 PGBD1Q96JS3 809 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 RMDN3Q96TC7 470 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 PORCNQ9H237 461 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 EFCC1Q9HA90 598 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 CNPY2Q9Y2B0 182 aa18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 MORC2Q9Y6X9 1032 aaPredicted RBP18.01■□□□□ 0.47
TRAFD1-203ENST00000547063 FRMPD4Q14CM0 1322 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 MYH7BA7E2Y1 1941 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 FIBPO43427 364 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 CCNT1O60563 726 aaKnown RBP18■□□□□ 0.47
TRAFD1-203ENST00000547063 SLC39A14Q15043 492 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 PLEKHH3Q7Z736 793 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 CRYGNQ8WXF5 182 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 IWS1Q96ST2 819 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 SLC5A4Q9NY91 659 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 COL20A1Q9P218 1284 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 RCOR1Q9UKL0 485 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 PCDHB6Q9Y5E3 794 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 CLIC4Q9Y696 253 aa18■□□□□ 0.47
TRAFD1-203ENST00000547063 ELP1O95163 1332 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 CYP3A7-CYP3A51PA0A087WV96 503 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 SLC15A5A6NIM6 579 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 SPTLC2O15270 562 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 CYP3A7P24462 503 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 CIITAP33076 1130 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 MCM7P33993 719 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 ZNF76P36508 570 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 HTRA3P83110 453 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 CEBPZQ03701 1054 aaKnown RBP17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 ZNF174Q15697 407 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 PCNX4Q63HM2 1172 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 GPR142Q7Z601 462 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 LINC00301Q8NCQ3 95 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 LEO1Q8WVC0 666 aaPredicted RBP17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 TAAR1Q96RJ0 339 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 PXMP2Q9NR77 195 aa17.99■□□□□ 0.47
TRAFD1-203ENST00000547063 DNAJC25-GNG10A0A024R161 153 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 DDX11L8A8MPP1 907 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 STAM2O75886 525 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 PTPREP23469 700 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 CCND2P30279 289 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 PGM5Q15124 567 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 FAM133AQ8N9E0 248 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 TMEM87AQ8NBN3 555 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 PDCD2LQ9BRP1 358 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 RNF186Q9NXI6 227 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 SAGE1Q9NXZ1 904 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 PLXNB2O15031 1838 aa17.98■□□□□ 0.47
TRAFD1-203ENST00000547063 NEMFO60524 1076 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 PPP6R2O75170 966 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 EIF2AK2P19525 551 aaKnown RBP17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 PRPHP41219 470 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 MAP2K1Q02750 393 aaPredicted RBP17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 NBR1Q14596 966 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 KIF22Q14807 665 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 PTPAQ15257 358 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 ARL6IP4Q66PJ3 421 aaKnown RBP17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 NIPA1Q7RTP0 329 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 MBOAT7Q96N66 472 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 BEGAINQ9BUH8 593 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 FTOQ9C0B1 505 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 DDX25Q9UHL0 483 aaKnown RBP17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 DIS3Q9Y2L1 958 aaKnown RBP17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 ZNFX1Q9P2E3 1918 aaKnown RBP17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 ZNF236Q9UL36 1845 aa17.97■□□□□ 0.47
TRAFD1-203ENST00000547063 GOLGA6L4A6NEF3 574 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 TRPA1O75762 1119 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 NR3C2P08235 984 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 ADORA2AP29274 412 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 MCM4P33991 863 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 ALDH5A1P51649 535 aaPredicted RBP17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 FCGRTP55899 365 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 ATP2C1P98194 919 aaPredicted RBP17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 SETQ01105 290 aaPredicted RBP17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 CNTN2Q02246 1040 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 PTGDRQ13258 359 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 GRB14Q14449 540 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 Q4G0T1 1027 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms