RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 CALCOCO1Q9P1Z2 691 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 RWDD2AQ9UIY3 292 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 PHLPP2Q6ZVD8 1323 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 XRN1Q8IZH2 1706 aaKnown RBP9.36□□□□□ -0.91
TMTC2-202ENST00000546590 GOLGA6L10A6NI86 522 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 FGFR1OPO95684 399 aaKnown RBP9.36□□□□□ -0.91
TMTC2-202ENST00000546590 KRT13P13646 458 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 RASA1P20936 1047 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 DNM2P50570 870 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 NFIAQ12857 509 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 ADAM9Q13443 819 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 SEPT2Q15019 361 aa9.36□□□□□ -0.91
TMTC2-202ENST00000546590 CHORDC1Q9UHD1 332 aaPredicted RBP9.36□□□□□ -0.91
TMTC2-202ENST00000546590 CYTH3O43739 400 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 HNRNPH2P55795 449 aaKnown RBP9.35□□□□□ -0.91
TMTC2-202ENST00000546590 ICA1Q05084 483 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 IFFO1Q0D2I5 559 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 CTTNQ14247 550 aaKnown RBP9.35□□□□□ -0.91
TMTC2-202ENST00000546590 ZSCAN26Q16670 478 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 KIAA0753Q2KHM9 967 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 MAP9Q49MG5 647 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 C8orf74Q6P047 294 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 MYOCDQ8IZQ8 938 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 TBC1D5Q92609 795 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 TEKT1Q969V4 418 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 PCIF1Q9H4Z3 704 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 ZNF446Q9NWS9 450 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 PRR5LQ6MZQ0 368 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 CCDC65Q8IXS2 484 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 ZNF384Q8TF68 577 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 MRRFQ96E11 262 aaKnown RBP9.35□□□□□ -0.91
TMTC2-202ENST00000546590 MS4A14Q96JA4 679 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 MMS19Q96T76 1030 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 FMN2Q9NZ56 1722 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 SLC37A4O43826 429 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 IL17AQ16552 155 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 TRIM65Q6PJ69 517 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 CLEC4GQ6UXB4 293 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 FBXO33Q7Z6M2 555 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 PNKPQ96T60 521 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 NUDT12Q9BQG2 462 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 LRRC53A6NM62 1247 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 KCNK3O14649 394 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 MMP10P09238 476 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 IQCEQ6IPM2 695 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 NSMFQ6X4W1 530 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 PLCD3Q8N3E9 789 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 ELMO3Q96BJ8 720 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 FAM212AQ96EL1 285 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 LACRTQ9GZZ8 138 aa9.35□□□□□ -0.91
TMTC2-202ENST00000546590 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.35□□□□□ -0.91
TMTC2-202ENST00000546590 NR2F2P24468 414 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 CHRNA5P30532 468 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 DGKHQ86XP1 1220 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 HSD3B7Q9H2F3 369 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 DPH5Q9H2P9 285 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 NDST4Q9H3R1 872 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 FAM204AQ9H8W3 233 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 QTRT2Q9H974 415 aaKnown RBP9.34□□□□□ -0.91
TMTC2-202ENST00000546590 MRFAP1Q9Y605 127 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 PPEF1O14829 653 aaPredicted RBP9.34□□□□□ -0.91
TMTC2-202ENST00000546590 ACTN1P12814 892 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 WDR19Q8NEZ3 1342 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 U2AF1L4Q8WU68 220 aaKnown RBP9.34□□□□□ -0.91
TMTC2-202ENST00000546590 RABGGTAQ92696 567 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 SHISA4Q96DD7 197 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 MED15Q96RN5 788 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 AP1M1Q9BXS5 423 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 BHMT2Q9H2M3 363 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 BARHL2Q9NY43 387 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 MYO1AQ9UBC5 1043 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 BCL9O00512 1426 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 CETN3O15182 167 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 PPP1R12BO60237 982 aaPredicted RBP9.34□□□□□ -0.91
TMTC2-202ENST00000546590 GUCY2DQ02846 1103 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 GABPB1Q06547 395 aaPredicted RBP9.34□□□□□ -0.91
TMTC2-202ENST00000546590 ADGRF4Q8IZF3 695 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 ZNF579Q8NAF0 562 aaKnown RBP9.34□□□□□ -0.91
TMTC2-202ENST00000546590 CCDC127Q96BQ5 260 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 RGL1Q9NZL6 768 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 MAD2L2Q9UI95 211 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 NALCNQ8IZF0 1738 aa9.34□□□□□ -0.91
TMTC2-202ENST00000546590 FLT1P17948 1338 aa9.34□□□□□ -0.92
TMTC2-202ENST00000546590 MYMKA6NI61 221 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 PPIP5K2O43314 1243 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 GH2P01242 217 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 CCNE1P24864 410 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 SF3B3Q15393 1217 aaKnown RBP9.33□□□□□ -0.92
TMTC2-202ENST00000546590 SFMBT2Q5VUG0 894 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 OGFOD1Q8N543 542 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 UBLCP1Q8WVY7 318 aaPredicted RBP9.33□□□□□ -0.92
TMTC2-202ENST00000546590 KRT12Q99456 494 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 TRIM9Q9C026 710 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 SETD1AO15047 1707 aaKnown RBP9.33□□□□□ -0.92
TMTC2-202ENST00000546590 CCDC169A6NNP5 214 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 BACH1O14867 736 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 VPS41P49754 854 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 KIF11P52732 1056 aa9.33□□□□□ -0.92
TMTC2-202ENST00000546590 CKAP4Q07065 602 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms