RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 MYADML2A6NDP7 307 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 CYTH3O43739 400 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 DTNBO60941 627 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 SNAI1O95863 264 aaPredicted RBP8.85□□□□□ -0.99
KDM1B-203ENST00000546309 ZNF865P0CJ78 1059 aaPredicted RBP8.85□□□□□ -0.99
KDM1B-203ENST00000546309 CALML3P27482 149 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 RGS2P41220 211 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 ZNF543Q08ER8 600 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 SNX17Q15036 470 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 ZNF792Q3KQV3 632 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 LRIT3Q3SXY7 679 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 RILPL1Q5EBL4 403 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 GJC2Q5T442 439 aaPredicted RBP8.85□□□□□ -0.99
KDM1B-203ENST00000546309 CCSAPQ6IQ19 270 aaPredicted RBP8.85□□□□□ -0.99
KDM1B-203ENST00000546309 NOSTRINQ8IVI9 506 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 STAG2Q8N3U4 1231 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 GPT2Q8TD30 523 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 GTF3C2Q8WUA4 911 aaPredicted RBP8.85□□□□□ -0.99
KDM1B-203ENST00000546309 DCAF4Q8WV16 495 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 TRIM43Q96BQ3 446 aaPredicted RBP8.85□□□□□ -0.99
KDM1B-203ENST00000546309 MTMR8Q96EF0 704 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 MAML3Q96JK9 1138 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 SPATA32Q96LK8 384 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 AIFM3Q96NN9 605 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 FEZ1Q99689 392 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 KATNBL1Q9H079 304 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.85□□□□□ -0.99
KDM1B-203ENST00000546309 CLIP2Q9UDT6 1046 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 DDX20Q9UHI6 824 aaKnown RBP8.85□□□□□ -0.99
KDM1B-203ENST00000546309 LRRC37A2A6NM11 1700 aa8.85□□□□□ -0.99
KDM1B-203ENST00000546309 ZNF536O15090 1300 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 ESYT2A0FGR8 921 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 KIF28PB7ZC32 967 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 VWA5AO00534 786 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 MPHOSPH10O00566 681 aaKnown RBP8.84□□□□□ -0.99
KDM1B-203ENST00000546309 PLA2G6O60733 806 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 PPP6R2O75170 966 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 VCANP13611 3396 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 CNGA1P29973 690 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 TRAPPC10P48553 1259 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 CCNA1P78396 465 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
KDM1B-203ENST00000546309 GUCY1B3Q02153 619 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 GSE1Q14687 1217 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 SLC39A14Q15043 492 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 NPY5RQ15761 445 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 SLC35G1Q2M3R5 365 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 C9orf50Q5SZB4 431 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 FAM83BQ5T0W9 1011 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 MFSD14CQ5VZR4 134 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 OLFML2BQ68BL8 750 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 BTNL9Q6UXG8 535 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 DIS3L2Q8IYB7 885 aaKnown RBP8.84□□□□□ -0.99
KDM1B-203ENST00000546309 CMTR1Q8N1G2 835 aaKnown RBP8.84□□□□□ -0.99
KDM1B-203ENST00000546309 LINC00301Q8NCQ3 95 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 CCDC148Q8NFR7 591 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 KCNG4Q8TDN1 519 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 CCDC12Q8WUD4 166 aaPredicted RBP8.84□□□□□ -0.99
KDM1B-203ENST00000546309 TNFRSF25Q93038 417 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 SYAP1Q96A49 352 aaPredicted RBP8.84□□□□□ -0.99
KDM1B-203ENST00000546309 GMCL1Q96IK5 515 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 CHAMP1Q96JM3 812 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 USP28Q96RU2 1077 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 BRMS1Q9HCU9 246 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 MTMR10Q9NXD2 777 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 BARHL2Q9NY43 387 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 IVNS1ABPQ9Y6Y0 642 aa8.84□□□□□ -0.99
KDM1B-203ENST00000546309 MYO9BQ13459 2157 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 SPTBN5Q9NRC6 3674 aaKnown RBP8.83□□□□□ -1
KDM1B-203ENST00000546309 A0A1W2PQ27 194 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 A0A1W2PQ64 194 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 A0A1W2PQD8 194 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 BTBD18B2RXH4 712 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 POTEB2H3BUK9 544 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 M0R2N6 131 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 FIBPO43427 364 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 ADAMTS4O75173 837 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 LETM1O95202 739 aaPredicted RBP8.83□□□□□ -1
KDM1B-203ENST00000546309 BMP15O95972 392 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 NDUFB10O96000 172 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 KRT2P35908 639 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 ATN1P54259 1190 aaPredicted RBP8.83□□□□□ -1
KDM1B-203ENST00000546309 USP14P54578 494 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 ZNF445P59923 1031 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 ICA1Q05084 483 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 ADALQ6DHV7 355 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 FAM173BQ6P4H8 233 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.83□□□□□ -1
KDM1B-203ENST00000546309 CCDC82Q8N4S0 544 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 SHCBP1Q8NEM2 672 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 RRP36Q96EU6 259 aaKnown RBP8.83□□□□□ -1
KDM1B-203ENST00000546309 GUCD1Q96NT3 240 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 PURBQ96QR8 312 aaKnown RBP8.83□□□□□ -1
KDM1B-203ENST00000546309 ZMYND12Q9H0C1 365 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 GDPD2Q9HCC8 539 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 GJB4Q9NTQ9 266 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 TFIP11Q9UBB9 837 aaKnown RBP8.83□□□□□ -1
KDM1B-203ENST00000546309 PPP1R9AQ9ULJ8 1098 aa8.83□□□□□ -1
KDM1B-203ENST00000546309 BAZ2BQ9UIF8 2168 aaKnown RBP8.83□□□□□ -1
KDM1B-203ENST00000546309 REV3LO60673 3130 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms