RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 SCARA3Q6AZY7 606 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 TTBK2Q6IQ55 1244 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 OLFM4Q6UX06 510 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 HDXQ7Z353 690 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 RTKN2Q8IZC4 609 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 LRRN4CLQ8ND94 238 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 FRMD6Q96NE9 622 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 GLIS2Q9BZE0 524 aaPredicted RBP5.34□□□□□ -1.55
LRP6-207ENST00000545658 TNKS2Q9H2K2 1166 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 ZNF408Q9H9D4 720 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 FBRSQ9HAH7 460 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 PRDM5Q9NQX1 630 aaPredicted RBP5.34□□□□□ -1.55
LRP6-207ENST00000545658 RNF19AQ9NV58 838 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 SNX11Q9Y5W9 270 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 BRCA2P51587 3418 aa5.34□□□□□ -1.55
LRP6-207ENST00000545658 A0A0C4DFX4 3053 aa5.34□□□□□ -1.56
LRP6-207ENST00000545658 WASHC2AQ641Q2 1341 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 ST20-MTHFSA0A0A6YYL1 179 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 PPM1GO15355 546 aaPredicted RBP5.33□□□□□ -1.56
LRP6-207ENST00000545658 PRPF40AO75400 957 aaKnown RBP5.33□□□□□ -1.56
LRP6-207ENST00000545658 LRIG2O94898 1065 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 MTHFSP49914 203 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 HUNKP57058 714 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 ETF1P62495 437 aaKnown RBP5.33□□□□□ -1.56
LRP6-207ENST00000545658 ST5P78524 1137 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 KIF23Q02241 960 aaPredicted RBP5.33□□□□□ -1.56
LRP6-207ENST00000545658 MAP3K11Q16584 847 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 NKPD1Q17RQ9 610 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 ZNF530Q6P9A1 599 aaPredicted RBP5.33□□□□□ -1.56
LRP6-207ENST00000545658 CYFIP1Q7L576 1253 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 ATG4DQ86TL0 474 aaPredicted RBP5.33□□□□□ -1.56
LRP6-207ENST00000545658 SPACA3Q8IXA5 215 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 SYNE4Q8N205 404 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 CNBD1Q8NA66 436 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 ASB11Q8WXH4 323 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 JDP2Q8WYK2 163 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 GAL3ST3Q96A11 431 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 MIPEPQ99797 713 aa5.33□□□□□ -1.56
LRP6-207ENST00000545658 DUSP9Q99956 384 aaKnown RBP5.33□□□□□ -1.56
LRP6-207ENST00000545658 COL6A3P12111 3177 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 BCORQ6W2J9 1755 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 ARFGEF2Q9Y6D5 1785 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 PITPNM2Q9BZ72 1349 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 COL4A5P29400 1685 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 A0A087WZG4 1122 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 PATL2C9JE40 543 aaKnown RBP5.32□□□□□ -1.56
LRP6-207ENST00000545658 NPHP1O15259 732 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 SLITRK5O94991 958 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 CANXP27824 592 aaKnown RBP5.32□□□□□ -1.56
LRP6-207ENST00000545658 ZP2Q05996 745 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 SEPT6Q14141 434 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 SLBPQ14493 270 aaKnown RBP eCLIP5.32□□□□□ -1.56
LRP6-207ENST00000545658 NKG7Q16617 165 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 RGMBQ6NW40 437 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 POU5F2Q8N7G0 328 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 FAM168AQ92567 244 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 PSMD1Q99460 953 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 FOXQ1Q9C009 403 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 WNT10AQ9GZT5 417 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 ADARB2Q9NS39 739 aaKnown RBP5.32□□□□□ -1.56
LRP6-207ENST00000545658 HDAC9Q9UKV0 1011 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 TPX2Q9ULW0 747 aaKnown RBP5.32□□□□□ -1.56
LRP6-207ENST00000545658 PCDHB5Q9Y5E4 795 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 AK5Q9Y6K8 562 aa5.32□□□□□ -1.56
LRP6-207ENST00000545658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.32□□□□□ -1.56
LRP6-207ENST00000545658 ANKRD33BA6NCL7 494 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 PRR33A8MZF0 331 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 C8AP07357 584 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 NPR1P16066 1061 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 GRK4P32298 578 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 EIF5P55010 431 aaKnown RBP5.31□□□□□ -1.56
LRP6-207ENST00000545658 AMOTQ4VCS5 1084 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 PLEKHO1Q53GL0 409 aaPredicted RBP5.31□□□□□ -1.56
LRP6-207ENST00000545658 ZNF648Q5T619 568 aaPredicted RBP5.31□□□□□ -1.56
LRP6-207ENST00000545658 CDKAL1Q5VV42 579 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 SLC23A3Q6PIS1 610 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 FBXO46Q6PJ61 603 aaPredicted RBP5.31□□□□□ -1.56
LRP6-207ENST00000545658 HID1Q8IV36 788 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 XAGE3Q8WTP9 111 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 CARD11Q9BXL7 1154 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 GPRC5DQ9NZD1 345 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 PGAP2Q9UHJ9 254 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 MAPK8IP1Q9UQF2 711 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 SNCAIPQ9Y6H5 919 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 ANKRD26Q9UPS8 1709 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 SNED1Q8TER0 1413 aa5.31□□□□□ -1.56
LRP6-207ENST00000545658 CACNA1SQ13698 1873 aa5.3□□□□□ -1.56
LRP6-207ENST00000545658 SCN11AQ9UI33 1791 aa5.3□□□□□ -1.56
LRP6-207ENST00000545658 KLRG2A4D1S0 409 aaPredicted RBP5.3□□□□□ -1.56
LRP6-207ENST00000545658 RBAK-RBAKDNI3L0D1 243 aa5.3□□□□□ -1.56
LRP6-207ENST00000545658 CLCN7P51798 805 aa5.3□□□□□ -1.56
LRP6-207ENST00000545658 FGD1P98174 961 aa5.3□□□□□ -1.56
LRP6-207ENST00000545658 EIF4A2Q14240 407 aaKnown RBP5.3□□□□□ -1.56
LRP6-207ENST00000545658 C1orf141Q5JVX7 400 aa5.3□□□□□ -1.56
LRP6-207ENST00000545658 AEBP1Q8IUX7 1158 aa5.3□□□□□ -1.56
LRP6-207ENST00000545658 RIN3Q8TB24 985 aa5.3□□□□□ -1.56
LRP6-207ENST00000545658 ZNF296Q8WUU4 475 aaPredicted RBP5.3□□□□□ -1.56
LRP6-207ENST00000545658 HSPA12BQ96MM6 686 aa5.3□□□□□ -1.56
LRP6-207ENST00000545658 GBA2Q9HCG7 927 aaPredicted RBP5.3□□□□□ -1.56
LRP6-207ENST00000545658 SCN7AQ01118 1682 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms