RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 OLFML2BQ68BL8 750 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 RALYLQ86SE5 291 aaKnown RBP8.63□□□□□ -1.03
CPSF7-224ENST00000544990 CHST13Q8NET6 341 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 NCOA7Q8NI08 942 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 ANKS1AQ92625 1134 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 DDX11Q96FC9 970 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 ESYT1Q9BSJ8 1104 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 RAVER2Q9HCJ3 691 aaKnown RBP8.63□□□□□ -1.03
CPSF7-224ENST00000544990 PPP4R2Q9NY27 417 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 HCSTQ9UBK5 93 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 PRR12Q9ULL5 1215 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 DIS3Q9Y2L1 958 aaKnown RBP8.63□□□□□ -1.03
CPSF7-224ENST00000544990 PLXNA1Q9UIW2 1896 aa8.63□□□□□ -1.03
CPSF7-224ENST00000544990 TNKSO95271 1327 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 MSCO60682 206 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 GPR37L1O60883 481 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 COBLO75128 1261 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 CDC45O75419 566 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 PDHBP11177 359 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 SART3Q15020 963 aaKnown RBP8.62□□□□□ -1.03
CPSF7-224ENST00000544990 GPATCH4Q5T3I0 446 aaKnown RBP8.62□□□□□ -1.03
CPSF7-224ENST00000544990 IFIT1BQ5T764 474 aaKnown RBP8.62□□□□□ -1.03
CPSF7-224ENST00000544990 BTNL9Q6UXG8 535 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 SKAP1Q86WV1 359 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 ANKRD35Q8N283 1001 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 ZNF516Q92618 1163 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 ALG2Q9H553 416 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 PRDM9Q9NQV7 894 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 PNMA2Q9UL42 364 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 GPSM3Q9Y4H4 160 aa8.62□□□□□ -1.03
CPSF7-224ENST00000544990 RBM8AQ9Y5S9 174 aaKnown RBP8.62□□□□□ -1.03
CPSF7-224ENST00000544990 FRMPD2Q68DX3 1309 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-224ENST00000544990 E7EWF7 191 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 FARP2O94887 1054 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-224ENST00000544990 PGK2P07205 417 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 SNHG28P0DPA3 235 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 ALAS1P13196 640 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 CNGA1P29973 690 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 CCND3P30281 292 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-224ENST00000544990 CYP2C19P33261 490 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 SLC16A2P36021 539 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 ZNF543Q08ER8 600 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 SYDE2Q5VT97 1194 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 TTBK2Q6IQ55 1244 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 PDXDC2PQ6P474 469 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 CCDC174Q6PII3 467 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 ENAHQ8N8S7 591 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-224ENST00000544990 ANKLE1Q8NAG6 615 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 SHISA4Q96DD7 197 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 MAML3Q96JK9 1138 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 AGBL1Q96MI9 1066 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 TRERF1Q96PN7 1200 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 HTATIP2Q9BUP3 242 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 LSG1Q9H089 658 aaKnown RBP8.61□□□□□ -1.03
CPSF7-224ENST00000544990 RANBP17Q9H2T7 1088 aaKnown RBP8.61□□□□□ -1.03
CPSF7-224ENST00000544990 ACAD9Q9H845 621 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 FLRT1Q9NZU1 646 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 CCPG1Q9ULG6 757 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 RIPK3Q9Y572 518 aa8.61□□□□□ -1.03
CPSF7-224ENST00000544990 ZNF536O15090 1300 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 IFIT3O14879 490 aaKnown RBP8.6□□□□□ -1.03
CPSF7-224ENST00000544990 ICAM1P05362 532 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 PARP1P09874 1014 aaKnown RBP8.6□□□□□ -1.03
CPSF7-224ENST00000544990 PDIA4P13667 645 aaKnown RBP8.6□□□□□ -1.03
CPSF7-224ENST00000544990 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
CPSF7-224ENST00000544990 WTAPQ15007 396 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 ZNF792Q3KQV3 632 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 ASPRV1Q53RT3 343 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 CYB5R4Q7L1T6 521 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 RASGRP2Q7LDG7 609 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 MSL3Q8N5Y2 521 aaKnown RBP8.6□□□□□ -1.03
CPSF7-224ENST00000544990 TINF2Q9BSI4 451 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 MTA3Q9BTC8 594 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 HOMER2Q9NSB8 354 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 RNF146Q9NTX7 359 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 NRBP1Q9UHY1 535 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 OGDHLQ9ULD0 1010 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 MYH6P13533 1939 aa8.6□□□□□ -1.03
CPSF7-224ENST00000544990 PFASO15067 1338 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 HTTP42858 3142 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 DNAJC25-GNG10A0A024R161 153 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 SLC27A2O14975 620 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 SEPT4O43236 478 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 DHX16O60231 1041 aaKnown RBP8.59□□□□□ -1.03
CPSF7-224ENST00000544990 IGHA2P01877 340 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 FBXO45P0C2W1 286 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 GOLGA8HP0CJ92 632 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 CYBAP13498 195 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 GGCXP38435 758 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 SNAP25P60880 206 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 KCNC4Q03721 635 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 NECTIN1Q15223 517 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 SEC23AQ15436 765 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 CREB3L3Q68CJ9 461 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 NECAB2Q7Z6G3 386 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 TMTC2Q8N394 836 aa8.59□□□□□ -1.03
CPSF7-224ENST00000544990 DDX20Q9UHI6 824 aaKnown RBP8.59□□□□□ -1.03
CPSF7-224ENST00000544990 CNPY2Q9Y2B0 182 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms