RNA–Protein interactions for RNA: ENST00000544365.5

ECHDC2-225, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 5

Gene ECHDC2, Length 1,335 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-225ENST00000544365 PXMP2Q9NR77 195 aa23.54■■□□□ 1.36
ECHDC2-225ENST00000544365 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.53■■□□□ 1.36
ECHDC2-225ENST00000544365 RBM47A0AV96 593 aaKnown RBP23.53■■□□□ 1.36
ECHDC2-225ENST00000544365 ADAMTS4O75173 837 aa23.53■■□□□ 1.36
ECHDC2-225ENST00000544365 MYCNP04198 464 aaPredicted RBP23.53■■□□□ 1.36
ECHDC2-225ENST00000544365 SYNRGQ9UMZ2 1314 aa23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 NR3C2P08235 984 aa23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 EIF2AK2P19525 551 aaKnown RBP23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 STXBP2Q15833 593 aa23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 HEATR3Q7Z4Q2 680 aa23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 DPF3Q92784 378 aa23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 CUL5Q93034 780 aa23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 UPF3AQ9H1J1 476 aaKnown RBP23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 SPC25Q9HBM1 224 aa23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 GNEQ9Y223 722 aaKnown RBP23.52■■□□□ 1.36
ECHDC2-225ENST00000544365 hCG_1984214I3L0E3 225 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 PIK3CDO00329 1044 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 SMPD1P17405 629 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 GJA9P57773 515 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 CCT2P78371 535 aaKnown RBP23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 NOL8Q76FK4 1167 aaKnown RBP23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 FCHSD1Q86WN1 690 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 ZNF713Q8N859 430 aaPredicted RBP23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 KLHDC9Q8NEP7 349 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 PDCD2LQ9BRP1 358 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 WDR11Q9BZH6 1224 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 SENP6Q9GZR1 1112 aaPredicted RBP23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 PSTPIP2Q9H939 334 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 Q9Y3F1 56 aa23.51■■□□□ 1.35
ECHDC2-225ENST00000544365 KIAA1217Q5T5P2 1943 aa23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 MEIS2O14770 477 aa23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 NKX3-2P78367 333 aa23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 NTRK3Q16288 839 aa23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 DUSP28Q4G0W2 176 aa23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 WWC2Q6AWC2 1192 aa23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 SMARCC2Q8TAQ2 1214 aa23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 GPKOWQ92917 476 aaPredicted RBP eCLIP23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 LARP6Q9BRS8 491 aaKnown RBP23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 TSEN34Q9BSV6 310 aaKnown RBP23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 GTF3C3Q9Y5Q9 886 aa23.5■■□□□ 1.35
ECHDC2-225ENST00000544365 PRPF3O43395 683 aaKnown RBP23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 EIF3JO75822 258 aaKnown RBP23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 CST5P28325 142 aaPredicted RBP23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 PGM5Q15124 567 aa23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 ANKRD1Q15327 319 aa23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 USP17L6PQ6QN14 398 aa23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 SCFD2Q8WU76 684 aa23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 NCOA5Q9HCD5 579 aaKnown RBP23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 RBM27Q9P2N5 1060 aaKnown RBP23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 PHF24Q9UPV7 400 aa23.49■■□□□ 1.35
ECHDC2-225ENST00000544365 ALPK3Q96L96 1907 aa23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 C6orf222P0C671 652 aaPredicted RBP23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 IFNAR1P17181 557 aa23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 PFKFB3Q16875 520 aaPredicted RBP23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 TMEM63BQ5T3F8 832 aa23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 CCSAPQ6IQ19 270 aaPredicted RBP23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 TLK2Q86UE8 772 aa23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 VSIG10LQ86VR7 867 aa23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 AP5M1Q9H0R1 490 aa23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 BARHL2Q9NY43 387 aa23.48■■□□□ 1.35
ECHDC2-225ENST00000544365 NKRFO15226 690 aaKnown RBP eCLIP23.47■■□□□ 1.352e-7■■■■□ 24.9
ECHDC2-225ENST00000544365 DYNC1LI2O43237 492 aaPredicted RBP23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 MYCLP12524 364 aaPredicted RBP23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 NEK4P51957 841 aa23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 NAPAP54920 295 aa23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 KCNA10Q16322 511 aa23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 GNASQ5JWF2 1037 aa23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 PPP1R18Q6NYC8 613 aa23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 TEX2Q8IWB9 1127 aa23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 PCSK9Q8NBP7 692 aaKnown RBP23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 RNF26Q9BY78 433 aaPredicted RBP23.47■■□□□ 1.35
ECHDC2-225ENST00000544365 MYADML2A6NDP7 307 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 MOXD2PA6NHM9 499 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 STXBP3O00186 592 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 CTAGE5O15320 804 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 EVI5O60447 810 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 TXNP10599 105 aaKnown RBP23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 SCG2P13521 617 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 AK2P54819 239 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 IRX5P78411 483 aaPredicted RBP23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 AKAP17AQ02040 695 aaKnown RBP23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 TTLL4Q14679 1199 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 TYW1BQ6NUM6 668 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 SEPT14Q6ZU15 432 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 PHKBQ93100 1093 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 NR2E3Q9Y5X4 410 aa23.46■■□□□ 1.35
ECHDC2-225ENST00000544365 FRMPD4Q14CM0 1322 aa23.45■■□□□ 1.35
ECHDC2-225ENST00000544365 CCND2P30279 289 aa23.45■■□□□ 1.34
ECHDC2-225ENST00000544365 ACLYP53396 1101 aa23.45■■□□□ 1.34
ECHDC2-225ENST00000544365 STK3Q13188 491 aa23.45■■□□□ 1.34
ECHDC2-225ENST00000544365 PKN1Q16512 942 aa23.45■■□□□ 1.34
ECHDC2-225ENST00000544365 SLC39A5Q6ZMH5 540 aa23.45■■□□□ 1.34
ECHDC2-225ENST00000544365 FERMT2Q96AC1 680 aa23.45■■□□□ 1.34
ECHDC2-225ENST00000544365 RIC8AQ9NPQ8 531 aa23.45■■□□□ 1.34
ECHDC2-225ENST00000544365 TPCN1Q9ULQ1 816 aa23.45■■□□□ 1.34
ECHDC2-225ENST00000544365 SMCO2A6NFE2 343 aa23.44■■□□□ 1.34
ECHDC2-225ENST00000544365 CPLX1O14810 134 aa23.44■■□□□ 1.34
ECHDC2-225ENST00000544365 PTGS1P23219 599 aa23.44■■□□□ 1.34
ECHDC2-225ENST00000544365 LRRC26Q2I0M4 334 aa23.44■■□□□ 1.34
ECHDC2-225ENST00000544365 CCDC62Q6P9F0 684 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms