RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 TMEM67Q5HYA8 995 aa26.53■■□□□ 1.84
CDKN3-207ENST00000543789 TBC1D10CQ8IV04 446 aa26.53■■□□□ 1.84
CDKN3-207ENST00000543789 ESR2Q92731 530 aa26.53■■□□□ 1.84
CDKN3-207ENST00000543789 TSPYL2Q9H2G4 693 aaPredicted RBP26.53■■□□□ 1.84
CDKN3-207ENST00000543789 LRRC37A2A6NM11 1700 aa26.53■■□□□ 1.84
CDKN3-207ENST00000543789 IQCF3P0C7M6 154 aa26.52■■□□□ 1.84
CDKN3-207ENST00000543789 GOLGA8HP0CJ92 632 aa26.52■■□□□ 1.84
CDKN3-207ENST00000543789 MFAP1P55081 439 aaKnown RBP26.52■■□□□ 1.84
CDKN3-207ENST00000543789 CHD9Q3L8U1 2897 aa26.52■■□□□ 1.84
CDKN3-207ENST00000543789 USH1GQ495M9 461 aa26.52■■□□□ 1.84
CDKN3-207ENST00000543789 DGKHQ86XP1 1220 aa26.52■■□□□ 1.84
CDKN3-207ENST00000543789 PPP1R13LQ8WUF5 828 aa26.52■■□□□ 1.84
CDKN3-207ENST00000543789 RILPL2Q969X0 211 aa26.52■■□□□ 1.84
CDKN3-207ENST00000543789 PITPNM1O00562 1244 aa26.51■■□□□ 1.83
CDKN3-207ENST00000543789 IL27Q8NEV9 243 aa26.51■■□□□ 1.83
CDKN3-207ENST00000543789 ADAMTS19Q8TE59 1207 aa26.51■■□□□ 1.83
CDKN3-207ENST00000543789 ZKSCAN3Q9BRR0 538 aa26.51■■□□□ 1.83
CDKN3-207ENST00000543789 UBA5Q9GZZ9 404 aa26.51■■□□□ 1.83
CDKN3-207ENST00000543789 MUC3AQ02505 3323 aa26.5■■□□□ 1.83
CDKN3-207ENST00000543789 BFSP2Q13515 415 aa26.5■■□□□ 1.83
CDKN3-207ENST00000543789 MICALL1Q8N3F8 863 aa26.5■■□□□ 1.83
CDKN3-207ENST00000543789 PHOSPHO2Q8TCD6 241 aa26.5■■□□□ 1.83
CDKN3-207ENST00000543789 FTOQ9C0B1 505 aaKnown RBP eCLIP26.5■■□□□ 1.83
CDKN3-207ENST00000543789 LNPKQ9C0E8 428 aa26.5■■□□□ 1.83
CDKN3-207ENST00000543789 MAF1Q9H063 256 aa26.5■■□□□ 1.83
CDKN3-207ENST00000543789 NOD1Q9Y239 953 aa26.5■■□□□ 1.83
CDKN3-207ENST00000543789 ZNF213O14771 459 aa26.49■■□□□ 1.83
CDKN3-207ENST00000543789 ARIH2O95376 493 aa26.49■■□□□ 1.83
CDKN3-207ENST00000543789 CCDC178Q5BJE1 867 aa26.49■■□□□ 1.83
CDKN3-207ENST00000543789 SLC9A7Q96T83 725 aa26.49■■□□□ 1.83
CDKN3-207ENST00000543789 CPVLQ9H3G5 476 aa26.49■■□□□ 1.83
CDKN3-207ENST00000543789 NEDD4P46934 1319 aa26.48■■□□□ 1.83
CDKN3-207ENST00000543789 CA3P07451 260 aa26.48■■□□□ 1.83
CDKN3-207ENST00000543789 SDSP20132 328 aa26.48■■□□□ 1.83
CDKN3-207ENST00000543789 NT5C2P49902 561 aa26.48■■□□□ 1.83
CDKN3-207ENST00000543789 CHMP4BP1P59074 171 aa26.48■■□□□ 1.83
CDKN3-207ENST00000543789 CCDC62Q6P9F0 684 aa26.48■■□□□ 1.83
CDKN3-207ENST00000543789 IQCA1Q86XH1 822 aa26.48■■□□□ 1.83
CDKN3-207ENST00000543789 UHRF1Q96T88 793 aaPredicted RBP26.48■■□□□ 1.83
CDKN3-207ENST00000543789 LCTP09848 1927 aa26.47■■□□□ 1.83
CDKN3-207ENST00000543789 MYO9BQ13459 2157 aa26.47■■□□□ 1.83
CDKN3-207ENST00000543789 CDC37Q16543 378 aaPredicted RBP26.47■■□□□ 1.83
CDKN3-207ENST00000543789 SEPT14Q6ZU15 432 aa26.47■■□□□ 1.83
CDKN3-207ENST00000543789 PNMA1Q8ND90 353 aa26.47■■□□□ 1.83
CDKN3-207ENST00000543789 NSUN6Q8TEA1 469 aaKnown RBP26.47■■□□□ 1.83
CDKN3-207ENST00000543789 AFG1LQ8WV93 481 aa26.47■■□□□ 1.83
CDKN3-207ENST00000543789 TBC1D5Q92609 795 aa26.47■■□□□ 1.83
CDKN3-207ENST00000543789 TAAR1Q96RJ0 339 aa26.47■■□□□ 1.83
CDKN3-207ENST00000543789 ABCB11O95342 1321 aa26.46■■□□□ 1.83
CDKN3-207ENST00000543789 PTGISQ16647 500 aa26.46■■□□□ 1.83
CDKN3-207ENST00000543789 MCF2L2Q86YR7 1114 aa26.46■■□□□ 1.83
CDKN3-207ENST00000543789 SYTL5Q8TDW5 730 aaPredicted RBP26.46■■□□□ 1.83
CDKN3-207ENST00000543789 ANKS1AQ92625 1134 aa26.46■■□□□ 1.83
CDKN3-207ENST00000543789 KAT14Q9H8E8 782 aa26.46■■□□□ 1.83
CDKN3-207ENST00000543789 KIF28PB7ZC32 967 aa26.45■■□□□ 1.82
CDKN3-207ENST00000543789 RFXAPO00287 272 aa26.45■■□□□ 1.82
CDKN3-207ENST00000543789 GTPBP6O43824 516 aaPredicted RBP26.45■■□□□ 1.82
CDKN3-207ENST00000543789 GH1P01241 217 aa26.45■■□□□ 1.82
CDKN3-207ENST00000543789 POU3F3P20264 500 aaPredicted RBP26.45■■□□□ 1.82
CDKN3-207ENST00000543789 LY6KQ17RY6 165 aa26.45■■□□□ 1.82
CDKN3-207ENST00000543789 ADGRF4Q8IZF3 695 aa26.45■■□□□ 1.82
CDKN3-207ENST00000543789 IWS1Q96ST2 819 aa26.45■■□□□ 1.82
CDKN3-207ENST00000543789 CERS4Q9HA82 394 aa26.45■■□□□ 1.82
CDKN3-207ENST00000543789 KDM4AO75164 1064 aa26.44■■□□□ 1.82
CDKN3-207ENST00000543789 MMP3P08254 477 aa26.44■■□□□ 1.82
CDKN3-207ENST00000543789 SKIV2LQ15477 1246 aaKnown RBP26.44■■□□□ 1.82
CDKN3-207ENST00000543789 STXBP2Q15833 593 aa26.44■■□□□ 1.82
CDKN3-207ENST00000543789 HERC6Q8IVU3 1022 aa26.44■■□□□ 1.82
CDKN3-207ENST00000543789 CCDC155Q8N6L0 562 aa26.44■■□□□ 1.82
CDKN3-207ENST00000543789 CAGE1Q8TC20 777 aa26.44■■□□□ 1.82
CDKN3-207ENST00000543789 RMDN3Q96TC7 470 aa26.44■■□□□ 1.82
CDKN3-207ENST00000543789 MTCH2Q9Y6C9 303 aa26.44■■□□□ 1.82
CDKN3-207ENST00000543789 CHD7Q9P2D1 2997 aa26.43■■□□□ 1.82
CDKN3-207ENST00000543789 BAIAP3O94812 1187 aa26.43■■□□□ 1.82
CDKN3-207ENST00000543789 CASTP20810 708 aaKnown RBP26.43■■□□□ 1.82
CDKN3-207ENST00000543789 ARHGAP1Q07960 439 aa26.43■■□□□ 1.82
CDKN3-207ENST00000543789 AAK1Q2M2I8 961 aa26.43■■□□□ 1.82
CDKN3-207ENST00000543789 ASPRV1Q53RT3 343 aa26.43■■□□□ 1.82
CDKN3-207ENST00000543789 B4GALNT3Q6L9W6 998 aa26.43■■□□□ 1.82
CDKN3-207ENST00000543789 SESTD1Q86VW0 696 aa26.43■■□□□ 1.82
CDKN3-207ENST00000543789 ZSCAN10Q96SZ4 725 aaPredicted RBP26.43■■□□□ 1.82
CDKN3-207ENST00000543789 COL20A1Q9P218 1284 aa26.43■■□□□ 1.82
CDKN3-207ENST00000543789 MRPL11Q9Y3B7 192 aaKnown RBP26.43■■□□□ 1.82
CDKN3-207ENST00000543789 COL9A1P20849 921 aa26.42■■□□□ 1.82
CDKN3-207ENST00000543789 TAP1Q03518 808 aa26.42■■□□□ 1.82
CDKN3-207ENST00000543789 GDF6Q6KF10 455 aaPredicted RBP26.42■■□□□ 1.82
CDKN3-207ENST00000543789 CWC27Q6UX04 472 aaKnown RBP26.42■■□□□ 1.82
CDKN3-207ENST00000543789 CHST3Q7LGC8 479 aa26.42■■□□□ 1.82
CDKN3-207ENST00000543789 AFAP1L1Q8TED9 768 aa26.42■■□□□ 1.82
CDKN3-207ENST00000543789 KAT2BQ92831 832 aa26.42■■□□□ 1.82
CDKN3-207ENST00000543789 B4E1Z4 1266 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 PARP1P09874 1014 aaKnown RBP26.41■■□□□ 1.82
CDKN3-207ENST00000543789 BMP1P13497 986 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 TFF2Q03403 129 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 QRICH1Q2TAL8 776 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 ARHGEF16Q5VV41 709 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 FBXO11Q86XK2 927 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 SMC5Q8IY18 1101 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 ARNTL2Q8WYA1 636 aa26.41■■□□□ 1.82
CDKN3-207ENST00000543789 RWDD1Q9H446 243 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms