RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PKD2L1Q9P0L9 805 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 STK24Q9Y6E0 443 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 PTPRMP28827 1452 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 PSMC4P43686 418 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 BAG6P46379 1132 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 KIF11P52732 1056 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 GTF2IP78347 998 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 DPH6Q7L8W6 267 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 DAAM1Q9Y4D1 1078 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 TRIM66O15016 1216 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 THAP12O43422 761 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 CCNE1P24864 410 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 SESN3P58005 492 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 MFSD14BQ5SR56 506 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 RUNDC3BQ96NL0 473 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 ALDH8A1Q9H2A2 487 aaPredicted RBP21.19■□□□□ 0.98
SUDS3-204ENST00000543473 BZW2Q9Y6E2 419 aaKnown RBP21.19■□□□□ 0.98
SUDS3-204ENST00000543473 GJA3Q9Y6H8 435 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 TBC1D22AQ8WUA7 517 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 TGFBRAP1Q8WUH2 860 aa21.19■□□□□ 0.98
SUDS3-204ENST00000543473 TNS3Q68CZ2 1445 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 I3L4J1 428 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 ADCY8P40145 1251 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 PPP2R5AQ15172 486 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 EXOC3L4Q17RC7 722 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 NEXMIFQ5QGS0 1516 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 KLRF2D3W0D1 207 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 NOL3O60936 208 aaKnown RBP21.18■□□□□ 0.98
SUDS3-204ENST00000543473 SEPT6Q14141 434 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 RBBP5Q15291 538 aaKnown RBP21.18■□□□□ 0.98
SUDS3-204ENST00000543473 MAEAQ7L5Y9 396 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 P3H4Q92791 437 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 CNOT10Q9H9A5 744 aaKnown RBP21.18■□□□□ 0.98
SUDS3-204ENST00000543473 ZNF526Q8TF50 670 aaPredicted RBP21.18■□□□□ 0.98
SUDS3-204ENST00000543473 SEC31BQ9NQW1 1179 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 CD2APQ9Y5K6 639 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 COMMD10Q9Y6G5 202 aa21.18■□□□□ 0.98
SUDS3-204ENST00000543473 ABCC12Q96J65 1359 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 MYL1P05976 194 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 GSPT2Q8IYD1 628 aaKnown RBP21.17■□□□□ 0.98
SUDS3-204ENST00000543473 DPF2Q92785 391 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 AGLP35573 1532 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 SMTNP53814 917 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 PLTPP55058 493 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 RASGRP4Q8TDF6 673 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 MAGOHBQ96A72 148 aaKnown RBP21.17■□□□□ 0.98
SUDS3-204ENST00000543473 METTL14Q9HCE5 456 aaKnown RBP21.17■□□□□ 0.98
SUDS3-204ENST00000543473 TEX33O43247 280 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 VSNL1P62760 191 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 FAM133BQ5BKY9 247 aaKnown RBP21.17■□□□□ 0.98
SUDS3-204ENST00000543473 FLAD1Q8NFF5 587 aa21.17■□□□□ 0.98
SUDS3-204ENST00000543473 IRX2Q9BZI1 471 aaPredicted RBP21.17■□□□□ 0.98
SUDS3-204ENST00000543473 ANO9A1A5B4 782 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 PDE6BP35913 854 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 CLEC11AQ9Y240 323 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 THRAP3Q9Y2W1 955 aaKnown RBP21.16■□□□□ 0.98
SUDS3-204ENST00000543473 NCAPD2Q15021 1401 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 LAD1O00515 517 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 FKBP3Q00688 224 aaKnown RBP21.16■□□□□ 0.98
SUDS3-204ENST00000543473 TCP10Q12799 353 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 ZKSCAN8Q15776 578 aaPredicted RBP21.16■□□□□ 0.98
SUDS3-204ENST00000543473 PPP1R21Q6ZMI0 780 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 AK8Q96MA6 479 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 ATP8A2Q9NTI2 1148 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 PASKQ96RG2 1323 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 SMIM24O75264 130 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 GOLGA8HP0CJ92 632 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 USP14P54578 494 aa21.16■□□□□ 0.98
SUDS3-204ENST00000543473 SMCR8Q8TEV9 937 aaPredicted RBP21.16■□□□□ 0.98
SUDS3-204ENST00000543473 LARP4BQ92615 738 aaKnown RBP21.16■□□□□ 0.98
SUDS3-204ENST00000543473 LAMC1P11047 1609 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 CASP1P29466 404 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 SLC1A4P43007 532 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 CYP2J2P51589 502 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 MTF1Q14872 753 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 RASIP1Q5U651 963 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 NYAP1Q6ZVC0 841 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 COG1Q8WTW3 980 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 GDAQ9Y2T3 454 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 IFNB1P01574 187 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 PCP11498 1178 aaKnown RBP21.15■□□□□ 0.98
SUDS3-204ENST00000543473 LGSNQ5TDP6 509 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 DCUN1D2Q6PH85 259 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 TYW1Q9NV66 732 aaKnown RBP21.15■□□□□ 0.98
SUDS3-204ENST00000543473 ERVV-1B6SEH8 477 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 KSR1Q8IVT5 923 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 NLGN1Q8N2Q7 840 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 RILPQ96NA2 401 aa21.15■□□□□ 0.98
SUDS3-204ENST00000543473 KIF3CO14782 793 aa21.14■□□□□ 0.98
SUDS3-204ENST00000543473 TSGA10IPQ3SY00 556 aa21.14■□□□□ 0.98
SUDS3-204ENST00000543473 ZNF579Q8NAF0 562 aaKnown RBP21.14■□□□□ 0.98
SUDS3-204ENST00000543473 GRK7Q8WTQ7 553 aa21.14■□□□□ 0.98
SUDS3-204ENST00000543473 PBKQ96KB5 322 aa21.14■□□□□ 0.98
SUDS3-204ENST00000543473 NDST4Q9H3R1 872 aa21.14■□□□□ 0.98
SUDS3-204ENST00000543473 GLE1Q53GS7 698 aaKnown RBP21.14■□□□□ 0.97
SUDS3-204ENST00000543473 SEPT14Q6ZU15 432 aa21.14■□□□□ 0.97
SUDS3-204ENST00000543473 EXOC7Q9UPT5 735 aa21.14■□□□□ 0.97
SUDS3-204ENST00000543473 PALLDQ8WX93 1383 aa21.14■□□□□ 0.97
SUDS3-204ENST00000543473 RIC8AQ9NPQ8 531 aa21.14■□□□□ 0.97
SUDS3-204ENST00000543473 C1orf167Q5SNV9 1468 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms