RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 ZNF654Q8IZM8 581 aa20.26■□□□□ 0.83
LTBR-210ENST00000542830 CTCFLQ8NI51 663 aaPredicted RBP20.26■□□□□ 0.83
LTBR-210ENST00000542830 TAAR1Q96RJ0 339 aa20.26■□□□□ 0.83
LTBR-210ENST00000542830 RMDN3Q96TC7 470 aa20.26■□□□□ 0.83
LTBR-210ENST00000542830 LAMA3Q16787 3333 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 PNMA6FA0A0J9YX94 578 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 HSD17B4P51659 736 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 TTLL4Q14679 1199 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 ARHGEF16Q5VV41 709 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 OR6J1Q8NGC5 347 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 LRCH3Q96II8 777 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 PIGSQ96S52 555 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 POLR3EQ9NVU0 708 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 COL20A1Q9P218 1284 aa20.25■□□□□ 0.83
LTBR-210ENST00000542830 CCDC69A6NI79 296 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 SH2B2O14492 632 aaPredicted RBP20.24■□□□□ 0.83
LTBR-210ENST00000542830 CYTH3O43739 400 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 PPP1R11O60927 126 aaPredicted RBP20.24■□□□□ 0.83
LTBR-210ENST00000542830 NEFLP07196 543 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 PTGS1P23219 599 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 LIFRP42702 1097 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 GNAQP50148 359 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 STXBP2Q15833 593 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 TMEM63BQ5T3F8 832 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 NFXL1Q6ZNB6 911 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 FAM126BQ8IXS8 530 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 SLC43A3Q8NBI5 491 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 LZTS2Q9BRK4 669 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 TBX21Q9UL17 535 aa20.24■□□□□ 0.83
LTBR-210ENST00000542830 OPLAHO14841 1288 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 CALM1P0DP23 149 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 CALM2P0DP24 149 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 CALM3P0DP25 149 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 TXNP10599 105 aaKnown RBP20.23■□□□□ 0.83
LTBR-210ENST00000542830 ITGB8P26012 769 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 SMARCA1P28370 1054 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 ITGA7Q13683 1181 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 SLC35G1Q2M3R5 365 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 SPZ1Q9BXG8 430 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 GPHNQ9NQX3 736 aaPredicted RBP20.23■□□□□ 0.83
LTBR-210ENST00000542830 PXMP2Q9NR77 195 aa20.23■□□□□ 0.83
LTBR-210ENST00000542830 BAZ2BQ9UIF8 2168 aaKnown RBP20.22■□□□□ 0.83
LTBR-210ENST00000542830 KPNA6O60684 536 aa20.22■□□□□ 0.83
LTBR-210ENST00000542830 TIMP1P01033 207 aa20.22■□□□□ 0.83
LTBR-210ENST00000542830 SZT2Q5T011 3432 aa20.21■□□□□ 0.83
LTBR-210ENST00000542830 GCOM1H8Y6P7 765 aaPredicted RBP20.21■□□□□ 0.83
LTBR-210ENST00000542830 EIF3JO75822 258 aaKnown RBP20.21■□□□□ 0.83
LTBR-210ENST00000542830 NR3C2P08235 984 aa20.21■□□□□ 0.83
LTBR-210ENST00000542830 POLR2MP0CAP2 368 aa20.21■□□□□ 0.83
LTBR-210ENST00000542830 EIF2AK2P19525 551 aaKnown RBP20.21■□□□□ 0.83
LTBR-210ENST00000542830 FPGSQ05932 587 aa20.21■□□□□ 0.83
LTBR-210ENST00000542830 SEPT14Q6ZU15 432 aa20.21■□□□□ 0.83
LTBR-210ENST00000542830 RRP36Q96EU6 259 aaKnown RBP20.21■□□□□ 0.83
LTBR-210ENST00000542830 MYL10Q9BUA6 226 aa20.21■□□□□ 0.83
LTBR-210ENST00000542830 SLC12A7Q9Y666 1083 aa20.21■□□□□ 0.83
LTBR-210ENST00000542830 A6NJR5 290 aa20.2■□□□□ 0.82
LTBR-210ENST00000542830 CD4P01730 458 aa20.2■□□□□ 0.82
LTBR-210ENST00000542830 MYL3P08590 195 aa20.2■□□□□ 0.82
LTBR-210ENST00000542830 PURAQ00577 322 aaKnown RBP20.2■□□□□ 0.82
LTBR-210ENST00000542830 KRT32Q14532 448 aa20.2■□□□□ 0.82
LTBR-210ENST00000542830 SHHQ15465 462 aa20.2■□□□□ 0.82
LTBR-210ENST00000542830 TSGA10IPQ3SY00 556 aa20.2■□□□□ 0.82
LTBR-210ENST00000542830 CCDC62Q6P9F0 684 aa20.2■□□□□ 0.82
LTBR-210ENST00000542830 NEK1Q96PY6 1258 aa20.2■□□□□ 0.82
LTBR-210ENST00000542830 MTG1Q9BT17 334 aaPredicted RBP20.2■□□□□ 0.82
LTBR-210ENST00000542830 SEC63Q9UGP8 760 aaKnown RBP20.2■□□□□ 0.82
LTBR-210ENST00000542830 ARIH2O95376 493 aa20.19■□□□□ 0.82
LTBR-210ENST00000542830 GH1P01241 217 aa20.19■□□□□ 0.82
LTBR-210ENST00000542830 MFSD5Q6N075 450 aa20.19■□□□□ 0.82
LTBR-210ENST00000542830 SGMS1Q86VZ5 419 aa20.19■□□□□ 0.82
LTBR-210ENST00000542830 COPS5Q92905 334 aa20.19■□□□□ 0.82
LTBR-210ENST00000542830 PDCD2LQ9BRP1 358 aa20.19■□□□□ 0.82
LTBR-210ENST00000542830 GRIN2DO15399 1336 aa20.19■□□□□ 0.82
LTBR-210ENST00000542830 HOXA13P31271 388 aaPredicted RBP20.18■□□□□ 0.82
LTBR-210ENST00000542830 PSMC6P62333 389 aa20.18■□□□□ 0.82
LTBR-210ENST00000542830 C9orf50Q5SZB4 431 aa20.18■□□□□ 0.82
LTBR-210ENST00000542830 KCNV1Q6PIU1 500 aa20.18■□□□□ 0.82
LTBR-210ENST00000542830 SYNE3Q6ZMZ3 975 aa20.18■□□□□ 0.82
LTBR-210ENST00000542830 TMEM199Q8N511 208 aa20.18■□□□□ 0.82
LTBR-210ENST00000542830 MRVI1Q9Y6F6 885 aa20.18■□□□□ 0.82
LTBR-210ENST00000542830 PPIGQ13427 754 aaKnown RBP eCLIP20.17■□□□□ 0.826e-13■□□□□ 10.7
LTBR-210ENST00000542830 COL9A3Q14050 684 aaPredicted RBP20.17■□□□□ 0.82
LTBR-210ENST00000542830 LY6KQ17RY6 165 aa20.17■□□□□ 0.82
LTBR-210ENST00000542830 DHX32Q7L7V1 743 aaKnown RBP20.17■□□□□ 0.82
LTBR-210ENST00000542830 PIBF1Q8WXW3 757 aa20.17■□□□□ 0.82
LTBR-210ENST00000542830 LRRC2Q9BYS8 371 aa20.17■□□□□ 0.82
LTBR-210ENST00000542830 ALDH8A1Q9H2A2 487 aaPredicted RBP20.17■□□□□ 0.82
LTBR-210ENST00000542830 DDX41Q9UJV9 622 aaKnown RBP20.17■□□□□ 0.82
LTBR-210ENST00000542830 KIAA1217Q5T5P2 1943 aa20.16■□□□□ 0.82
LTBR-210ENST00000542830 B4GALT4O60513 344 aa20.16■□□□□ 0.82
LTBR-210ENST00000542830 HMGB1P09429 215 aaKnown RBP20.16■□□□□ 0.82
LTBR-210ENST00000542830 SUPT20HL2P0C7V6 817 aa20.16■□□□□ 0.82
LTBR-210ENST00000542830 MYCLP12524 364 aaPredicted RBP20.16■□□□□ 0.82
LTBR-210ENST00000542830 CCND2P30279 289 aa20.16■□□□□ 0.82
LTBR-210ENST00000542830 PGM5Q15124 567 aa20.16■□□□□ 0.82
LTBR-210ENST00000542830 VSIG10LQ86VR7 867 aa20.16■□□□□ 0.82
LTBR-210ENST00000542830 FCHSD1Q86WN1 690 aa20.16■□□□□ 0.82
LTBR-210ENST00000542830 SRBD1Q8N5C6 995 aaKnown RBP20.16■□□□□ 0.82
LTBR-210ENST00000542830 FANCBQ8NB91 859 aa20.16■□□□□ 0.82
LTBR-210ENST00000542830 EMID1Q96A84 441 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms