RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 LENG9Q96B70 501 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 ARHGEF10LQ9HCE6 1279 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 MAPK8IP1Q9UQF2 711 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 MYMKA6NI61 221 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 TNNT1P13805 278 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 SREBF1P36956 1147 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 NBPF9Q3BBW0 867 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 MCTP2Q6DN12 878 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 CIAPIN1Q6FI81 312 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 CCDC125Q86Z20 511 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 SPICE1Q8N0Z3 855 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 RAD54LQ92698 747 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 GJA10Q969M2 543 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 PPP1R13BQ96KQ4 1090 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 CTAGE1Q96RT6 745 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 TAOK3Q9H2K8 898 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 VEZTQ9HBM0 779 aa15.91■□□□□ 0.14
LDB3-207ENST00000542786 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.91■□□□□ 0.14
LDB3-207ENST00000542786 TRIM49BA6NDI0 452 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 PLA2G6O60733 806 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 CAP2P40123 477 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 COPB1P53618 953 aaKnown RBP15.9■□□□□ 0.14
LDB3-207ENST00000542786 EHHADHQ08426 723 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 MCM6Q14566 821 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 TCP11X2Q5H9J9 407 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 TEX2Q8IWB9 1127 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 ETNPPLQ8TBG4 499 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 DHTKD1Q96HY7 919 aaPredicted RBP15.9■□□□□ 0.14
LDB3-207ENST00000542786 DUSP9Q99956 384 aaKnown RBP15.9■□□□□ 0.14
LDB3-207ENST00000542786 SGIP1Q9BQI5 828 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 RAB34Q9BZG1 259 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 MTFR1LQ9H019 292 aa15.9■□□□□ 0.14
LDB3-207ENST00000542786 ITIH6Q6UXX5 1313 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 H7C1D1 291 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 PIK3CDO00329 1044 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 SLC26A4O43511 780 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 ASIC1P78348 528 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 ARHGAP4P98171 946 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 SPAG1Q07617 926 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 SPIRE1Q08AE8 756 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 STK4Q13043 487 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 KIAA0895Q8NCT3 520 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 SNX29Q8TEQ0 813 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 LARP4BQ92615 738 aaKnown RBP15.89■□□□□ 0.13
LDB3-207ENST00000542786 TEPSINQ96N21 525 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 VCPKMTQ9H867 229 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 MYOZ2Q9NPC6 264 aa15.89■□□□□ 0.13
LDB3-207ENST00000542786 TRMT1Q9NXH9 659 aaKnown RBP15.89■□□□□ 0.13
LDB3-207ENST00000542786 KCNJ18B7U540 433 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 FECHP22830 423 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 CIITAP33076 1130 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 AMPD3Q01432 767 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 KCNJ12Q14500 433 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 Q4G0T1 1027 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 FAM83BQ5T0W9 1011 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 SV2BQ7L1I2 683 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 GTPBP4Q9BZE4 634 aaKnown RBP15.88■□□□□ 0.13
LDB3-207ENST00000542786 RANBP17Q9H2T7 1088 aaKnown RBP15.88■□□□□ 0.13
LDB3-207ENST00000542786 GOPCQ9HD26 462 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 EXOC1Q9NV70 894 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 LTBP3Q9NS15 1303 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 PVALEFA0A1B0GWK0 134 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 PHF20L1A8MW92 1017 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 DYNC1I1O14576 645 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 RIOK3O14730 519 aaKnown RBP15.88■□□□□ 0.13
LDB3-207ENST00000542786 PSMA7O14818 248 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 EGFRP00533 1210 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 FOSP01100 380 aaPredicted RBP15.88■□□□□ 0.13
LDB3-207ENST00000542786 FCER1AP12319 257 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 PRELPP51888 382 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 STAT2P52630 851 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 PDE4DQ08499 809 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 USH1GQ495M9 461 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 KRT79Q5XKE5 535 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 UNC13DQ70J99 1090 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 GLIS2Q9BZE0 524 aaPredicted RBP15.88■□□□□ 0.13
LDB3-207ENST00000542786 THAP9Q9H5L6 903 aa15.88■□□□□ 0.13
LDB3-207ENST00000542786 SMCHD1A6NHR9 2005 aa15.87■□□□□ 0.13
LDB3-207ENST00000542786 CYP3A4P08684 503 aa15.87■□□□□ 0.13
LDB3-207ENST00000542786 CCNE1P24864 410 aa15.87■□□□□ 0.13
LDB3-207ENST00000542786 ADKP55263 362 aaKnown RBP15.87■□□□□ 0.13
LDB3-207ENST00000542786 CEP135Q66GS9 1140 aa15.87■□□□□ 0.13
LDB3-207ENST00000542786 MIGA2Q7L4E1 593 aa15.87■□□□□ 0.13
LDB3-207ENST00000542786 P2RX5Q93086 422 aa15.87■□□□□ 0.13
LDB3-207ENST00000542786 PANX2Q96RD6 677 aa15.87■□□□□ 0.13
LDB3-207ENST00000542786 TAB2Q9NYJ8 693 aa15.87■□□□□ 0.13
LDB3-207ENST00000542786 PCDHA12Q9UN75 941 aa15.87■□□□□ 0.13
LDB3-207ENST00000542786 FAM86B1E9PN63 330 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 TBX3O15119 743 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 ARHGAP6O43182 974 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 FAM86B2P0C5J1 330 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 CCT6AP40227 531 aaKnown RBP15.86■□□□□ 0.13
LDB3-207ENST00000542786 IKQ13123 557 aaPredicted RBP15.86■□□□□ 0.13
LDB3-207ENST00000542786 PTPN14Q15678 1187 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 REXO1L1PQ8IX06 675 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 HPS3Q969F9 1004 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 DNAJC19Q96DA6 116 aa15.86■□□□□ 0.13
LDB3-207ENST00000542786 BAG1Q99933 345 aaPredicted RBP15.86■□□□□ 0.13
LDB3-207ENST00000542786 ATAD5Q96QE3 1844 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms