RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 GJD2Q9UKL4 321 aa26.39■■□□□ 1.82
HOMER3-205ENST00000542541 COBLO75128 1261 aa26.39■■□□□ 1.81
HOMER3-205ENST00000542541 BRAPQ7Z569 592 aa26.39■■□□□ 1.81
HOMER3-205ENST00000542541 LOC102724159A0A0B4J2E5 919 aa26.38■■□□□ 1.81
HOMER3-205ENST00000542541 HOXC6P09630 235 aa26.38■■□□□ 1.81
HOMER3-205ENST00000542541 HSPA1AP0DMV8 641 aaKnown RBP26.38■■□□□ 1.81
HOMER3-205ENST00000542541 HSPA1BP0DMV9 641 aaKnown RBP26.38■■□□□ 1.81
HOMER3-205ENST00000542541 PWP2Q15269 919 aaKnown RBP26.38■■□□□ 1.81
HOMER3-205ENST00000542541 ZNF792Q3KQV3 632 aa26.38■■□□□ 1.81
HOMER3-205ENST00000542541 PIK3AP1Q6ZUJ8 805 aa26.38■■□□□ 1.81
HOMER3-205ENST00000542541 USP6NLQ92738 828 aa26.38■■□□□ 1.81
HOMER3-205ENST00000542541 FERMT3Q86UX7 667 aa26.37■■□□□ 1.81
HOMER3-205ENST00000542541 PURBQ96QR8 312 aaKnown RBP26.37■■□□□ 1.81
HOMER3-205ENST00000542541 IWS1Q96ST2 819 aa26.37■■□□□ 1.81
HOMER3-205ENST00000542541 PXMP2Q9NR77 195 aa26.37■■□□□ 1.81
HOMER3-205ENST00000542541 SOWAHBA6NEL2 793 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 KIF28PB7ZC32 967 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 BRD1O95696 1058 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 PKP1Q13835 747 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 ZNF467Q7Z7K2 595 aaPredicted RBP26.36■■□□□ 1.81
HOMER3-205ENST00000542541 PGBD1Q96JS3 809 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 ZSWIM8A7E2V4 1837 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 FOXN1O15353 648 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 SREBF1P36956 1147 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 CTCFP49711 727 aaPredicted RBP26.36■■□□□ 1.81
HOMER3-205ENST00000542541 ALDH5A1P51649 535 aaPredicted RBP26.36■■□□□ 1.81
HOMER3-205ENST00000542541 TBCKQ8TEA7 893 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 APBA2Q99767 749 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 SRRDQ9UH36 339 aa26.36■■□□□ 1.81
HOMER3-205ENST00000542541 FRMPD4Q14CM0 1322 aa26.35■■□□□ 1.81
HOMER3-205ENST00000542541 RPTORQ8N122 1335 aa26.35■■□□□ 1.81
HOMER3-205ENST00000542541 RBBP6Q7Z6E9 1792 aaKnown RBP26.35■■□□□ 1.81
HOMER3-205ENST00000542541 ASB14A6NK59 587 aa26.35■■□□□ 1.81
HOMER3-205ENST00000542541 XRCC5P13010 732 aaKnown RBP26.35■■□□□ 1.81
HOMER3-205ENST00000542541 EIF2AK2P19525 551 aaKnown RBP26.35■■□□□ 1.81
HOMER3-205ENST00000542541 FLT3LGP49771 235 aa26.35■■□□□ 1.81
HOMER3-205ENST00000542541 PRMT2P55345 433 aa26.35■■□□□ 1.81
HOMER3-205ENST00000542541 XRRA1Q6P2D8 792 aa26.35■■□□□ 1.81
HOMER3-205ENST00000542541 PDCD2LQ9BRP1 358 aa26.35■■□□□ 1.81
HOMER3-205ENST00000542541 CHMP5Q9NZZ3 219 aa26.35■■□□□ 1.81
HOMER3-205ENST00000542541 NOL7Q9UMY1 257 aaKnown RBP26.35■■□□□ 1.81
HOMER3-205ENST00000542541 F13A1P00488 732 aa26.34■■□□□ 1.81
HOMER3-205ENST00000542541 CYP2B6P20813 491 aa26.34■■□□□ 1.81
HOMER3-205ENST00000542541 USP11P51784 963 aa26.34■■□□□ 1.81
HOMER3-205ENST00000542541 PGM5Q15124 567 aa26.34■■□□□ 1.81
HOMER3-205ENST00000542541 INF2Q27J81 1249 aa26.34■■□□□ 1.81
HOMER3-205ENST00000542541 MSL3Q8N5Y2 521 aaKnown RBP26.34■■□□□ 1.81
HOMER3-205ENST00000542541 PLXNB2O15031 1838 aa26.33■■□□□ 1.81
HOMER3-205ENST00000542541 NR3C2P08235 984 aa26.33■■□□□ 1.81
HOMER3-205ENST00000542541 HSPA8P11142 646 aaKnown RBP26.33■■□□□ 1.81
HOMER3-205ENST00000542541 ARHGAP4P98171 946 aa26.33■■□□□ 1.81
HOMER3-205ENST00000542541 PRKCZQ05513 592 aa26.33■■□□□ 1.81
HOMER3-205ENST00000542541 RESTQ13127 1097 aa26.33■■□□□ 1.81
HOMER3-205ENST00000542541 MAML3Q96JK9 1138 aa26.33■■□□□ 1.81
HOMER3-205ENST00000542541 ZNF236Q9UL36 1845 aa26.33■■□□□ 1.81
HOMER3-205ENST00000542541 MGAMO43451 1857 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 CASP8AP2Q9UKL3 1982 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 CCND2P30279 289 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 TRAPPC10P48553 1259 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 CAP1Q01518 475 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 RILPL1Q5EBL4 403 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 EARS2Q5JPH6 523 aaKnown RBP26.32■■□□□ 1.8
HOMER3-205ENST00000542541 FOXD4L5Q5VV16 416 aaPredicted RBP26.32■■□□□ 1.8
HOMER3-205ENST00000542541 PCNX4Q63HM2 1172 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 NEK8Q86SG6 692 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 NPLOC4Q8TAT6 608 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 FOXD4L4Q8WXT5 416 aaPredicted RBP26.32■■□□□ 1.8
HOMER3-205ENST00000542541 NAP1L4Q99733 375 aaKnown RBP26.32■■□□□ 1.8
HOMER3-205ENST00000542541 GABRQQ9UN88 632 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 CYP3A4P08684 503 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 UBXN2AP68543 259 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 PDE4DQ08499 809 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 IRF5Q13568 498 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 STXBP2Q15833 593 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 MAMDC4Q6UXC1 1216 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 VSIG10LQ86VR7 867 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 TRMT44Q8IYL2 757 aaKnown RBP26.32■■□□□ 1.8
HOMER3-205ENST00000542541 FGD4Q96M96 766 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 ZDHHC9Q9Y397 364 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 ATP6V1DQ9Y5K8 247 aa26.32■■□□□ 1.8
HOMER3-205ENST00000542541 STAM2O75886 525 aa26.31■■□□□ 1.8
HOMER3-205ENST00000542541 OLFML2BQ68BL8 750 aa26.31■■□□□ 1.8
HOMER3-205ENST00000542541 CRYGNQ8WXF5 182 aa26.31■■□□□ 1.8
HOMER3-205ENST00000542541 TRIM17Q9Y577 477 aa26.31■■□□□ 1.8
HOMER3-205ENST00000542541 ASTN1O14525 1302 aa26.3■■□□□ 1.8
HOMER3-205ENST00000542541 FAM205CA6NFA0 338 aa26.3■■□□□ 1.8
HOMER3-205ENST00000542541 MYCLP12524 364 aaPredicted RBP26.3■■□□□ 1.8
HOMER3-205ENST00000542541 EDNRBP24530 442 aa26.3■■□□□ 1.8
HOMER3-205ENST00000542541 ZNF76P36508 570 aa26.3■■□□□ 1.8
HOMER3-205ENST00000542541 MORC4Q8TE76 937 aa26.3■■□□□ 1.8
HOMER3-205ENST00000542541 TINF2Q9BSI4 451 aa26.3■■□□□ 1.8
HOMER3-205ENST00000542541 ZNFX1Q9P2E3 1918 aaKnown RBP26.3■■□□□ 1.8
HOMER3-205ENST00000542541 MYSM1Q5VVJ2 828 aa26.29■■□□□ 1.8
HOMER3-205ENST00000542541 OTOP1Q7RTM1 612 aa26.29■■□□□ 1.8
HOMER3-205ENST00000542541 SYNGAP1Q96PV0 1343 aa26.29■■□□□ 1.8
HOMER3-205ENST00000542541 EIF3JO75822 258 aaKnown RBP26.28■■□□□ 1.8
HOMER3-205ENST00000542541 GCFC2P16383 781 aaKnown RBP26.28■■□□□ 1.8
HOMER3-205ENST00000542541 LBX1P52954 281 aa26.28■■□□□ 1.8
HOMER3-205ENST00000542541 LETM2Q2VYF4 491 aa26.28■■□□□ 1.8
HOMER3-205ENST00000542541 MOXD1Q6UVY6 613 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms