RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 NFXL1Q6ZNB6 911 aa20.25■□□□□ 0.83
TRPT1-212ENST00000542040 RPUSD2Q8IZ73 545 aaKnown RBP20.25■□□□□ 0.83
TRPT1-212ENST00000542040 TMEM87BQ96K49 555 aa20.25■□□□□ 0.83
TRPT1-212ENST00000542040 PNMA6FA0A0J9YX94 578 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.24■□□□□ 0.83
TRPT1-212ENST00000542040 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.24■□□□□ 0.83
TRPT1-212ENST00000542040 CCDC69A6NI79 296 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 GH1P01241 217 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 CD4P01730 458 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 CALM1P0DP23 149 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 CALM2P0DP24 149 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 CALM3P0DP25 149 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 IRX5P78411 483 aaPredicted RBP20.24■□□□□ 0.83
TRPT1-212ENST00000542040 PTPN11Q06124 597 aaPredicted RBP20.24■□□□□ 0.83
TRPT1-212ENST00000542040 C9orf50Q5SZB4 431 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 STAG2Q8N3U4 1231 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 TAAR1Q96RJ0 339 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 HIPK3Q9H422 1215 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 STXBP5LQ9Y2K9 1186 aa20.24■□□□□ 0.83
TRPT1-212ENST00000542040 TMEM265A0A087WTH1 108 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 GCOM1H8Y6P7 765 aaPredicted RBP20.23■□□□□ 0.83
TRPT1-212ENST00000542040 POLR2MP0CAP2 368 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 BMP2KLQ5H9B9 411 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 SYNE3Q6ZMZ3 975 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 SEPT14Q6ZU15 432 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 HOMER1Q86YM7 354 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 MTMR8Q96EF0 704 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 PPP1R12CQ9BZL4 782 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 RIOX1Q9H6W3 641 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 MTMR10Q9NXD2 777 aa20.23■□□□□ 0.83
TRPT1-212ENST00000542040 SEC63Q9UGP8 760 aaKnown RBP20.23■□□□□ 0.83
TRPT1-212ENST00000542040 RANBP2P49792 3224 aaKnown RBP20.22■□□□□ 0.83
TRPT1-212ENST00000542040 A6NJR5 290 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 DDAH1O94760 285 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 CASTP20810 708 aaKnown RBP20.22■□□□□ 0.83
TRPT1-212ENST00000542040 ITGB8P26012 769 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 SMARCA1P28370 1054 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 HSD17B4P51659 736 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 PURAQ00577 322 aaKnown RBP20.22■□□□□ 0.83
TRPT1-212ENST00000542040 NFRKBQ6P4R8 1299 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 CUL5Q93034 780 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
TRPT1-212ENST00000542040 ESYT1Q9BSJ8 1104 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 ANO2Q9NQ90 1003 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 NOD1Q9Y239 953 aa20.22■□□□□ 0.83
TRPT1-212ENST00000542040 DDX49Q9Y6V7 483 aaKnown RBP20.22■□□□□ 0.83
TRPT1-212ENST00000542040 NR3C2P08235 984 aa20.21■□□□□ 0.83
TRPT1-212ENST00000542040 TROAPQ12815 778 aa20.21■□□□□ 0.83
TRPT1-212ENST00000542040 LAMC2Q13753 1193 aa20.21■□□□□ 0.83
TRPT1-212ENST00000542040 FAM47CQ5HY64 1035 aa20.21■□□□□ 0.83
TRPT1-212ENST00000542040 IGDCC4Q8TDY8 1250 aa20.21■□□□□ 0.83
TRPT1-212ENST00000542040 ALDH8A1Q9H2A2 487 aaPredicted RBP20.21■□□□□ 0.83
TRPT1-212ENST00000542040 PXMP2Q9NR77 195 aa20.21■□□□□ 0.83
TRPT1-212ENST00000542040 MRVI1Q9Y6F6 885 aa20.21■□□□□ 0.83
TRPT1-212ENST00000542040 MCM3APO60318 1980 aa20.21■□□□□ 0.83
TRPT1-212ENST00000542040 DNAH12Q6ZR08 3092 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 PRC1O43663 620 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 FGBP02675 491 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 TGFB3P10600 412 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 EIF2AK2P19525 551 aaKnown RBP20.2■□□□□ 0.82
TRPT1-212ENST00000542040 PSMC6P62333 389 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 GHRHRQ02643 423 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 STOX1Q6ZVD7 989 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 Q7L0L9 218 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 CHST3Q7LGC8 479 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 MB21D2Q8IYB1 491 aaPredicted RBP20.2■□□□□ 0.82
TRPT1-212ENST00000542040 CCDC155Q8N6L0 562 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 RETREG2Q8NC44 543 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 SLC17A8Q8NDX2 589 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 TBC1D5Q92609 795 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 PIGSQ96S52 555 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 KATNAL1Q9BW62 490 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 IL23AQ9NPF7 189 aa20.2■□□□□ 0.82
TRPT1-212ENST00000542040 B4GALT4O60513 344 aa20.19■□□□□ 0.82
TRPT1-212ENST00000542040 STAM2O75886 525 aa20.19■□□□□ 0.82
TRPT1-212ENST00000542040 PFKMP08237 780 aa20.19■□□□□ 0.82
TRPT1-212ENST00000542040 CSF2RAP15509 400 aa20.19■□□□□ 0.82
TRPT1-212ENST00000542040 CCND2P30279 289 aa20.19■□□□□ 0.82
TRPT1-212ENST00000542040 LIFRP42702 1097 aa20.19■□□□□ 0.82
TRPT1-212ENST00000542040 DGKDQ16760 1214 aa20.19■□□□□ 0.82
TRPT1-212ENST00000542040 GNPTABQ3T906 1256 aa20.19■□□□□ 0.82
TRPT1-212ENST00000542040 ZNF654Q8IZM8 581 aa20.19■□□□□ 0.82
TRPT1-212ENST00000542040 LTBP2Q14767 1821 aa20.18■□□□□ 0.82
TRPT1-212ENST00000542040 SLC27A2O14975 620 aa20.18■□□□□ 0.82
TRPT1-212ENST00000542040 MYCLP12524 364 aaPredicted RBP20.18■□□□□ 0.82
TRPT1-212ENST00000542040 CYP2C18P33260 490 aa20.18■□□□□ 0.82
TRPT1-212ENST00000542040 BFSP2Q13515 415 aa20.18■□□□□ 0.82
TRPT1-212ENST00000542040 CREB3L3Q68CJ9 461 aa20.18■□□□□ 0.82
TRPT1-212ENST00000542040 CCDC62Q6P9F0 684 aa20.18■□□□□ 0.82
TRPT1-212ENST00000542040 DHX37Q8IY37 1157 aaKnown RBP20.18■□□□□ 0.82
TRPT1-212ENST00000542040 SPZ1Q9BXG8 430 aa20.18■□□□□ 0.82
TRPT1-212ENST00000542040 LSG1Q9H089 658 aaKnown RBP20.18■□□□□ 0.82
TRPT1-212ENST00000542040 TRPV6Q9H1D0 765 aa20.18■□□□□ 0.82
TRPT1-212ENST00000542040 SLC12A7Q9Y666 1083 aa20.18■□□□□ 0.82
TRPT1-212ENST00000542040 RFC2P35250 354 aa20.17■□□□□ 0.82
TRPT1-212ENST00000542040 KRT32Q14532 448 aa20.17■□□□□ 0.82
TRPT1-212ENST00000542040 LY6KQ17RY6 165 aa20.17■□□□□ 0.82
TRPT1-212ENST00000542040 NBPF20Q3BBV1 942 aa20.17■□□□□ 0.82
TRPT1-212ENST00000542040 TMEM240Q5SV17 173 aa20.17■□□□□ 0.82
TRPT1-212ENST00000542040 TMEM63BQ5T3F8 832 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms