RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 TSGA10Q9BZW7 698 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 MTIF3Q9H2K0 278 aaKnown RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 VCX3BQ9H321 246 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 EIF4G3O43432 1585 aaKnown RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 A0A0G2JLW4 131 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 DDIT3P35638 169 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 LIG3P49916 1009 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 CAPRIN1Q14444 709 aaKnown RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 PAN2Q504Q3 1202 aaKnown RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 PPFIBP2Q8ND30 876 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 METTL22Q9BUU2 404 aaPredicted RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 TSPYL2Q9H2G4 693 aaPredicted RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 XAB2Q9HCS7 855 aaKnown RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 CACNA2D2Q9NY47 1150 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 ZNF804BA4D1E1 1349 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 KLRF2D3W0D1 207 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 LRRN2O75325 713 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 GUCY2FP51841 1108 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 PDE1BQ01064 536 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 PAK1Q13153 545 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 C8orf74Q6P047 294 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 C11orf74Q86VG3 221 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 VSIG1Q86XK7 387 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 C1orf131Q8NDD1 294 aaKnown RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 RAVER2Q9HCJ3 691 aaKnown RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 ARFGAP3Q9NP61 516 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 SLC39A2Q9NP94 309 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 ZNF148Q9UQR1 794 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 AFF2P51816 1311 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 NPATQ14207 1427 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 POC1B-GALNT4F8VUJ3 575 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 DNAJC6O75061 913 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 PPFIA4O75335 1185 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 PCK1P35558 622 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 FAM173BQ6P4H8 233 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 CCDC13Q8IYE1 715 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 ZFYVE19Q96K21 471 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 CALN1Q9BXU9 219 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 HPCAL4Q9UM19 191 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 LRRC9Q6ZRR7 1453 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 CELF2O95319 508 aaKnown RBP6.87□□□□□ -1.31
DMD-228ENST00000541735 APOA4P06727 396 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 SESN3P58005 492 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 VWA3BQ502W6 1294 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 SFMBT2Q5VUG0 894 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 RASGRP4Q8TDF6 673 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 TNNQ9UQP3 1299 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 AKR1B15C9JRZ8 316 aaPredicted RBP6.87□□□□□ -1.31
DMD-228ENST00000541735 GCKRQ14397 625 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 SMIM5Q71RC9 77 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 MMP19Q99542 508 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 EDEM3Q9BZQ6 932 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 PIK3R2O00459 728 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 GPC4O75487 556 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 XRCC5P13010 732 aaKnown RBP6.87□□□□□ -1.31
DMD-228ENST00000541735 ATP5DP30049 168 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 DYNLL1P63167 89 aaKnown RBP6.87□□□□□ -1.31
DMD-228ENST00000541735 LBRQ14739 615 aaKnown RBP6.87□□□□□ -1.31
DMD-228ENST00000541735 TCEA2Q15560 299 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 RUFY3Q7L099 469 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 FAM71BQ8TC56 605 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 SUCLG2Q96I99 432 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 DPH5Q9H2P9 285 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 KDM2BQ8NHM5 1336 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 USP17L3A6NCW0 530 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 USP17L4A6NCW7 530 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 PRRG1O14668 218 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 STAT2P52630 851 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 CLNS1AP54105 237 aaKnown RBP6.87□□□□□ -1.31
DMD-228ENST00000541735 USP17L1Q7RTZ2 530 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 RPF1Q9H9Y2 349 aaKnown RBP6.87□□□□□ -1.31
DMD-228ENST00000541735 SENP1Q9P0U3 644 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 MROH5Q6ZUA9 1318 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 IFT140Q96RY7 1462 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 ZSCAN9O15535 394 aaPredicted RBP6.87□□□□□ -1.31
DMD-228ENST00000541735 SRGAP2BP0DMP2 458 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 EPB42P16452 691 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 CAPN2P17655 700 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 PRKCQQ04759 706 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 NBPF11Q86T75 865 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 IFT43Q96FT9 208 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 BACH2Q9BYV9 841 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 ZWILCHQ9H900 591 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 KIAA1024Q9UPX6 916 aa6.87□□□□□ -1.31
DMD-228ENST00000541735 CREB3O43889 395 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 RFX3P48380 749 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 ZSCAN23Q3MJ62 389 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 SLC27A3Q5K4L6 730 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 SDCCAG3Q96C92 435 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 GLT8D2Q9H1C3 349 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 SEC31BQ9NQW1 1179 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 SKAP2O75563 359 aaPredicted RBP6.86□□□□□ -1.31
DMD-228ENST00000541735 ATP11AP98196 1134 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 MYO1EQ12965 1108 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 NME3Q13232 169 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 TRMT10CQ7L0Y3 403 aaKnown RBP6.86□□□□□ -1.31
DMD-228ENST00000541735 NDUFAF2Q8N183 169 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 LRGUKQ96M69 825 aa6.86□□□□□ -1.31
DMD-228ENST00000541735 TACO1Q9BSH4 297 aaKnown RBP6.86□□□□□ -1.31
DMD-228ENST00000541735 POLD4Q9HCU8 107 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms