RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 IL17RAQ96F46 866 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 STAMBPL1Q96FJ0 436 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CFAP36Q96G28 342 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 IFT74Q96LB3 600 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 GPR101Q96P66 508 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 TCF12Q99081 682 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CENPKQ9BS16 269 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 NUF2Q9BZD4 464 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 SCAND2PQ9GZW5 306 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 PIH1D3Q9NQM4 214 aaKnown RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CHPF2Q9P2E5 772 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 BAIAP2L1Q9UHR4 511 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 DIS3Q9Y2L1 958 aaKnown RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 PTPN23Q9H3S7 1636 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 TEX14Q8IWB6 1497 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 FANCD2Q9BXW9 1451 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CUX1P39880 1505 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 NSD2O96028 1365 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 DPPA5A6NC42 116 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 GADD45BO75293 160 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 SUPT3HO75486 399 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 KRT14P02533 472 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 APOEP02649 317 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 ALDH2P05091 517 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 GNAT2P19087 354 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 ATP6V1C1P21283 382 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 PCK1P35558 622 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 STAT6P42226 847 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 SCTRP47872 440 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 MXI1P50539 228 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 BPIFB4P59827 614 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 GNG11P61952 73 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 LACTBP83111 547 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 ATP8B2P98198 1209 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 MAP3K12Q12852 859 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 LSAMPQ13449 338 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 ITGA9Q13797 1035 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 RASGRF1Q13972 1273 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 TNIP1Q15025 636 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 TAF11Q15544 211 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 GSTA3Q16772 222 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 GLE1Q53GS7 698 aaKnown RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 ANKRD20A8PQ5CZ79 823 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 SYCP2LQ5T4T6 812 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 IL23RQ5VWK5 629 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 NAA35Q5VZE5 725 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 KDM7AQ6ZMT4 941 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 BEND5Q7L4P6 421 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 UBE3BQ7Z3V4 1068 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 KRT28Q7Z3Y7 464 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 VPS36Q86VN1 386 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 MAP7D3Q8IWC1 876 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 PAF1Q8N7H5 531 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 CCDC63Q8NA47 563 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 TOR1AIP2Q8NFQ8 470 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 ZNF473Q8WTR7 871 aaKnown RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 LENG1Q96BZ8 264 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 SDCCAG3Q96C92 435 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 MED30Q96HR3 178 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 ANKRD36BP1Q96IX9 119 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 COG3Q96JB2 828 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 VPS50Q96JG6 964 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 CCDC42Q96M95 316 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 HAPLN3Q96S86 360 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 PRPF18Q99633 342 aaKnown RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 RIOK1Q9BRS2 568 aaKnown RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 TMUB1Q9BVT8 246 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 TIPINQ9BVW5 301 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 PRR14Q9BWN1 585 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 FHDC1Q9C0D6 1143 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 DNAI2Q9GZS0 605 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 CARD9Q9H257 536 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 VPS16Q9H269 839 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 SEPT11Q9NVA2 429 aaKnown RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 CCDC87Q9NVE4 849 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 EURLQ9NYK6 297 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 CRNNQ9UBG3 495 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 CCPG1Q9ULG6 757 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 HPCAL4Q9UM19 191 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 RPL26L1Q9UNX3 145 aaKnown RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 GIT1Q9Y2X7 761 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 FAM32AQ9Y421 112 aaKnown RBP5.68□□□□□ -1.5
SNHG1-218ENST00000541615 SHANK2Q9UPX8 1470 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 ABCC2Q92887 1545 aa5.68□□□□□ -1.5
SNHG1-218ENST00000541615 YTHDC2Q9H6S0 1430 aaKnown RBP5.67□□□□□ -1.5
SNHG1-218ENST00000541615 RAPGEF2Q9Y4G8 1499 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 ARPC4-TTLL3A0A0A6YYG9 625 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 LINC00854A0A1B0GVQ3 168 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 MAGEA13PA6NCF6 341 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 HNRNPCL2B2RXH8 293 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 GCOM1H8Y6P7 765 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-218ENST00000541615 M0QX08 132 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 TNFRSF10AO00220 468 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 CETN3O15182 167 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 KMOO15229 486 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 HNRNPCL1O60812 293 aaKnown RBP5.67□□□□□ -1.5
SNHG1-218ENST00000541615 BCAR3O75815 825 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 KRT6AP02538 564 aa5.67□□□□□ -1.5
SNHG1-218ENST00000541615 KRT6BP04259 564 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms