RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 RAD50Q92878 1312 aa28.1■■■□□ 2.09
LEMD3-203ENST00000541171 CHMP4BP1P59074 171 aa28.09■■■□□ 2.09
LEMD3-203ENST00000541171 AAMPQ13685 434 aa28.09■■■□□ 2.09
LEMD3-203ENST00000541171 CDC37Q16543 378 aaPredicted RBP28.09■■■□□ 2.09
LEMD3-203ENST00000541171 DEFB128Q7Z7B8 93 aa28.09■■■□□ 2.09
LEMD3-203ENST00000541171 TBC1D5Q92609 795 aa28.09■■■□□ 2.09
LEMD3-203ENST00000541171 B4E1Z4 1266 aa28.08■■■□□ 2.09
LEMD3-203ENST00000541171 IGFBP4P22692 258 aa28.08■■■□□ 2.09
LEMD3-203ENST00000541171 NUCB1Q02818 461 aa28.08■■■□□ 2.09
LEMD3-203ENST00000541171 CCDC178Q5BJE1 867 aa28.08■■■□□ 2.09
LEMD3-203ENST00000541171 VWCEQ96DN2 955 aa28.08■■■□□ 2.09
LEMD3-203ENST00000541171 OSBPL3Q9H4L5 887 aa28.08■■■□□ 2.09
LEMD3-203ENST00000541171 MYO9BQ13459 2157 aa28.08■■■□□ 2.09
LEMD3-203ENST00000541171 VCANP13611 3396 aa28.07■■■□□ 2.08
LEMD3-203ENST00000541171 DHX16O60231 1041 aaKnown RBP28.07■■■□□ 2.08
LEMD3-203ENST00000541171 ARIH2O95376 493 aa28.07■■■□□ 2.08
LEMD3-203ENST00000541171 ADGRE1Q14246 886 aa28.07■■■□□ 2.08
LEMD3-203ENST00000541171 TTLL4Q14679 1199 aa28.07■■■□□ 2.08
LEMD3-203ENST00000541171 CCDC85BQ15834 202 aaPredicted RBP28.07■■■□□ 2.08
LEMD3-203ENST00000541171 ADGRF4Q8IZF3 695 aa28.07■■■□□ 2.08
LEMD3-203ENST00000541171 RGS22Q8NE09 1264 aa28.07■■■□□ 2.08
LEMD3-203ENST00000541171 SYMPKQ92797 1274 aaKnown RBP28.07■■■□□ 2.08
LEMD3-203ENST00000541171 ZSCAN10Q96SZ4 725 aaPredicted RBP28.07■■■□□ 2.08
LEMD3-203ENST00000541171 VAT1LQ9HCJ6 419 aa28.07■■■□□ 2.08
LEMD3-203ENST00000541171 A6NJR5 290 aa28.06■■■□□ 2.08
LEMD3-203ENST00000541171 KPNA6O60684 536 aa28.06■■■□□ 2.08
LEMD3-203ENST00000541171 MYOGP15173 224 aa28.06■■■□□ 2.08
LEMD3-203ENST00000541171 TAAR1Q96RJ0 339 aa28.06■■■□□ 2.08
LEMD3-203ENST00000541171 ABCB11O95342 1321 aa28.06■■■□□ 2.08
LEMD3-203ENST00000541171 SEPT14Q6ZU15 432 aa28.05■■■□□ 2.08
LEMD3-203ENST00000541171 EXOC6Q8TAG9 804 aa28.05■■■□□ 2.08
LEMD3-203ENST00000541171 ZSWIM5Q9P217 1185 aa28.05■■■□□ 2.08
LEMD3-203ENST00000541171 HIP1O00291 1037 aa28.04■■■□□ 2.08
LEMD3-203ENST00000541171 ATP2A2P16615 1042 aaKnown RBP28.04■■■□□ 2.08
LEMD3-203ENST00000541171 IMMTQ16891 758 aaKnown RBP28.04■■■□□ 2.08
LEMD3-203ENST00000541171 TJAP1Q5JTD0 557 aa28.04■■■□□ 2.08
LEMD3-203ENST00000541171 NFRKBQ6P4R8 1299 aa28.04■■■□□ 2.08
LEMD3-203ENST00000541171 ENAHQ8N8S7 591 aaPredicted RBP28.04■■■□□ 2.08
LEMD3-203ENST00000541171 RETREG2Q8NC44 543 aa28.04■■■□□ 2.08
LEMD3-203ENST00000541171 SYTL5Q8TDW5 730 aaPredicted RBP28.04■■■□□ 2.08
LEMD3-203ENST00000541171 ANKS1AQ92625 1134 aa28.04■■■□□ 2.08
LEMD3-203ENST00000541171 PFKMP08237 780 aa28.03■■■□□ 2.08
LEMD3-203ENST00000541171 PARP1P09874 1014 aaKnown RBP28.03■■■□□ 2.08
LEMD3-203ENST00000541171 NT5C2P49902 561 aa28.03■■■□□ 2.08
LEMD3-203ENST00000541171 QRICH1Q2TAL8 776 aa28.03■■■□□ 2.08
LEMD3-203ENST00000541171 ASPRV1Q53RT3 343 aa28.03■■■□□ 2.08
LEMD3-203ENST00000541171 PPP2R2DQ66LE6 453 aa28.03■■■□□ 2.08
LEMD3-203ENST00000541171 DSCC1Q9BVC3 393 aa28.03■■■□□ 2.08
LEMD3-203ENST00000541171 COL20A1Q9P218 1284 aa28.03■■■□□ 2.08
LEMD3-203ENST00000541171 NOD1Q9Y239 953 aa28.03■■■□□ 2.08
LEMD3-203ENST00000541171 LY6KQ17RY6 165 aa28.02■■■□□ 2.08
LEMD3-203ENST00000541171 CHST3Q7LGC8 479 aa28.02■■■□□ 2.08
LEMD3-203ENST00000541171 FBXO11Q86XK2 927 aa28.02■■■□□ 2.08
LEMD3-203ENST00000541171 MCF2L2Q86YR7 1114 aa28.02■■■□□ 2.08
LEMD3-203ENST00000541171 NSUN6Q8TEA1 469 aaKnown RBP28.02■■■□□ 2.08
LEMD3-203ENST00000541171 AFG1LQ8WV93 481 aa28.02■■■□□ 2.08
LEMD3-203ENST00000541171 CTNNA3Q9UI47 895 aa28.02■■■□□ 2.08
LEMD3-203ENST00000541171 PCDHA11Q9Y5I1 949 aa28.02■■■□□ 2.08
LEMD3-203ENST00000541171 CHD9Q3L8U1 2897 aa28.01■■■□□ 2.07
LEMD3-203ENST00000541171 CCDC62Q6P9F0 684 aa28.01■■■□□ 2.07
LEMD3-203ENST00000541171 RMDN3Q96TC7 470 aa28.01■■■□□ 2.07
LEMD3-203ENST00000541171 KRT23Q9C075 422 aa28.01■■■□□ 2.07
LEMD3-203ENST00000541171 FTOQ9C0B1 505 aaKnown RBP eCLIP28.01■■■□□ 2.07
LEMD3-203ENST00000541171 MRPL11Q9Y3B7 192 aaKnown RBP28.01■■■□□ 2.07
LEMD3-203ENST00000541171 GBF1Q92538 1859 aa28.01■■■□□ 2.07
LEMD3-203ENST00000541171 SCN10AQ9Y5Y9 1956 aa28■■■□□ 2.07
LEMD3-203ENST00000541171 GH1P01241 217 aa28■■■□□ 2.07
LEMD3-203ENST00000541171 ACTN1P12814 892 aa28■■■□□ 2.07
LEMD3-203ENST00000541171 PTPN11Q06124 597 aaPredicted RBP28■■■□□ 2.07
LEMD3-203ENST00000541171 STXBP2Q15833 593 aa28■■■□□ 2.07
LEMD3-203ENST00000541171 UBAC1Q9BSL1 405 aa28■■■□□ 2.07
LEMD3-203ENST00000541171 JMJD4Q9H9V9 463 aa28■■■□□ 2.07
LEMD3-203ENST00000541171 IQCF3P0C7M6 154 aa27.99■■■□□ 2.07
LEMD3-203ENST00000541171 EIF2AK2P19525 551 aaKnown RBP27.99■■■□□ 2.07
LEMD3-203ENST00000541171 BFSP2Q13515 415 aa27.99■■■□□ 2.07
LEMD3-203ENST00000541171 ARHGEF16Q5VV41 709 aa27.99■■■□□ 2.07
LEMD3-203ENST00000541171 THEGQ9P2T0 379 aa27.99■■■□□ 2.07
LEMD3-203ENST00000541171 TTC28Q96AY4 2481 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 SCN5AQ14524 2016 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 LAMA4Q16363 1823 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 CFBP00751 764 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 MMP3P08254 477 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 RFC2P35250 354 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 MICALL1Q8N3F8 863 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 IWS1Q96ST2 819 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 MAF1Q9H063 256 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 CNNM2Q9H8M5 875 aa27.98■■■□□ 2.07
LEMD3-203ENST00000541171 SPTBN5Q9NRC6 3674 aaKnown RBP27.97■■■□□ 2.07
LEMD3-203ENST00000541171 PITPNM1O00562 1244 aa27.97■■■□□ 2.07
LEMD3-203ENST00000541171 ARHGAP1Q07960 439 aa27.97■■■□□ 2.07
LEMD3-203ENST00000541171 PTGISQ16647 500 aa27.97■■■□□ 2.07
LEMD3-203ENST00000541171 TMEM67Q5HYA8 995 aa27.97■■■□□ 2.07
LEMD3-203ENST00000541171 IFIT1BQ5T764 474 aaKnown RBP27.97■■■□□ 2.07
LEMD3-203ENST00000541171 STAG2Q8N3U4 1231 aa27.97■■■□□ 2.07
LEMD3-203ENST00000541171 ATXN2LQ8WWM7 1075 aaKnown RBP27.96■■■□□ 2.07
LEMD3-203ENST00000541171 IL25Q9H293 177 aa27.96■■■□□ 2.07
LEMD3-203ENST00000541171 CA3P07451 260 aa27.95■■■□□ 2.06
LEMD3-203ENST00000541171 CASTP20810 708 aaKnown RBP27.95■■■□□ 2.06
LEMD3-203ENST00000541171 GDF6Q6KF10 455 aaPredicted RBP27.95■■■□□ 2.06
LEMD3-203ENST00000541171 AMNQ9BXJ7 453 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms