RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SNCAIPQ9Y6H5 919 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 COL11A1P12107 1806 aaPredicted RBP13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 NFIBO00712 420 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 FLOT1O75955 427 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 ICAM1P05362 532 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 STAT3P40763 770 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 USP11P51784 963 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 NOL9Q5SY16 702 aaKnown RBP13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 KCNK18Q7Z418 384 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 TRMT44Q8IYL2 757 aaKnown RBP13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 CPXCR1Q8N123 301 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 ATG4CQ96DT6 458 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 AK8Q96MA6 479 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 SLC38A10Q9HBR0 1119 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 COL20A1Q9P218 1284 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 CCPG1Q9ULG6 757 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 PPP1R9AQ9ULJ8 1098 aa13.85□□□□□ -0.19
AP003559.1-201ENST00000540906 SPDYE3A6NKU9 549 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 BECN2A8MW95 431 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 POTECB2RU33 542 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 GOLGA6L19H0YKK7 550 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 GTPBP6O43824 516 aaPredicted RBP13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 TXLNAP40222 546 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 VGLL4Q14135 290 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 PRR16Q569H4 304 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 MUM1L1Q5H9M0 696 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 SPC24Q8NBT2 197 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 ETNPPLQ8TBG4 499 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 BLOC1S4Q9NUP1 217 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 LRWD1Q9UFC0 647 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 AFG3L2Q9Y4W6 797 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 PTPRFP10586 1907 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 ABCB11O95342 1321 aa13.84□□□□□ -0.19
AP003559.1-201ENST00000540906 KLRC4O43908 158 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 COBLO75128 1261 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 ATP1A3P13637 1013 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 GCFC2P16383 781 aaKnown RBP13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 SUPT20HL1Q3ZLR7 823 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 RASSF8Q8NHQ8 419 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 DCPSQ96C86 337 aaKnown RBP13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 NAT10Q9H0A0 1025 aaKnown RBP13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 KBTBD4Q9NVX7 518 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 MRPL11Q9Y3B7 192 aaKnown RBP13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 IGLV3-22A0A075B6J6 115 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 GCOM1H8Y6P7 765 aaPredicted RBP13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 FOSP01100 380 aaPredicted RBP13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 POLR2MP0CAP2 368 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 EPHX2P34913 555 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 SARM1Q6SZW1 724 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 KRT26Q7Z3Y9 468 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 C12orf42Q96LP6 360 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 ZNF830Q96NB3 372 aaPredicted RBP13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 TRIM5Q9C035 493 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 HOMER2Q9NSB8 354 aa13.83□□□□□ -0.2
AP003559.1-201ENST00000540906 PPP1R3GB7ZBB8 358 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 MSH4O15457 936 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 PEX10O60683 326 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 SMC2O95347 1197 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 CYP3A4P08684 503 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 ALAS1P13196 640 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 CIITAP33076 1130 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 USP14P54578 494 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 SPIRE1Q08AE8 756 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 Q4G0T1 1027 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 MOXD1Q6UVY6 613 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 SULF1Q8IWU6 871 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 TRIML1Q8N9V2 468 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 IL31RAQ8NI17 732 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 SNX29Q8TEQ0 813 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 TRIM44Q96DX7 344 aaPredicted RBP13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 CDCA5Q96FF9 252 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 CLMNQ96JQ2 1002 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 AS3MTQ9HBK9 375 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 NRBP1Q9UHY1 535 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 GDAQ9Y2T3 454 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 RIPK3Q9Y572 518 aa13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 RBBP6Q7Z6E9 1792 aaKnown RBP13.82□□□□□ -0.2
AP003559.1-201ENST00000540906 VWA5AO00534 786 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 IKBKBO14920 756 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 RPN1P04843 607 aaKnown RBP13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 POTEJP0CG39 1038 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 HSD17B4P51659 736 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 MAP3K9P80192 1104 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 PDIA5Q14554 519 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 DHX8Q14562 1220 aaKnown RBP13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 MCM6Q14566 821 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 TMEM266Q2M3C6 531 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 TMEM119Q4V9L6 283 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 HSP90AA4PQ58FG1 418 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 GSDMAQ96QA5 445 aa13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 PURBQ96QR8 312 aaKnown RBP13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 PYM1Q9BRP8 204 aaKnown RBP13.81□□□□□ -0.2
AP003559.1-201ENST00000540906 FANCLQ9NW38 375 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms