RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 JMJD4Q9H9V9 463 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 VAT1LQ9HCJ6 419 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 PCDHA1Q9Y5I3 950 aa12.05□□□□□ -0.48
CDCA3-208ENST00000540683 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
CDCA3-208ENST00000540683 LTBP2Q14767 1821 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 PNMA6FA0A0J9YX94 578 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 PALM3A6NDB9 673 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-208ENST00000540683 CCDC69A6NI79 296 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 PFKMP08237 780 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
CDCA3-208ENST00000540683 TXNP10599 105 aaKnown RBP12.04□□□□□ -0.48
CDCA3-208ENST00000540683 FAAP100Q0VG06 881 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 KRT32Q14532 448 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 GNPTABQ3T906 1256 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 ZNF697Q5TEC3 545 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 MFSD5Q6N075 450 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 SLC30A10Q6XR72 485 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 NFXL1Q6ZNB6 911 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 RASGRP2Q7LDG7 609 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 RPUSD2Q8IZ73 545 aaKnown RBP12.04□□□□□ -0.48
CDCA3-208ENST00000540683 DEFB123Q8N688 67 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 CCDC155Q8N6L0 562 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 LENG1Q96BZ8 264 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-208ENST00000540683 RRP36Q96EU6 259 aaKnown RBP12.04□□□□□ -0.48
CDCA3-208ENST00000540683 RNPC3Q96LT9 517 aaKnown RBP12.04□□□□□ -0.48
CDCA3-208ENST00000540683 MTG1Q9BT17 334 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-208ENST00000540683 KATNAL1Q9BW62 490 aa12.04□□□□□ -0.48
CDCA3-208ENST00000540683 TRIM43BA6NCK2 446 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 GCOM1H8Y6P7 765 aaPredicted RBP12.03□□□□□ -0.48
CDCA3-208ENST00000540683 CFBP00751 764 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 GH1P01241 217 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 POLR2MP0CAP2 368 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 TGFB3P10600 412 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 CASTP20810 708 aaKnown RBP12.03□□□□□ -0.48
CDCA3-208ENST00000540683 LIFRP42702 1097 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 HSD17B4P51659 736 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 GHRHRQ02643 423 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 PTH1RQ03431 593 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 NFRKBQ6P4R8 1299 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 CXCL17Q6UXB2 119 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 FAM126BQ8IXS8 530 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 SLC43A3Q8NBI5 491 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 SYTL5Q8TDW5 730 aaPredicted RBP12.03□□□□□ -0.48
CDCA3-208ENST00000540683 TRIM43Q96BQ3 446 aaPredicted RBP12.03□□□□□ -0.48
CDCA3-208ENST00000540683 MTMR8Q96EF0 704 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 ESYT1Q9BSJ8 1104 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 RIOX1Q9H6W3 641 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 ANO2Q9NQ90 1003 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 MAD2L2Q9UI95 211 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 TBX21Q9UL17 535 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 LRRC37A2A6NM11 1700 aa12.03□□□□□ -0.48
CDCA3-208ENST00000540683 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.02□□□□□ -0.49
CDCA3-208ENST00000540683 MYADML2A6NDP7 307 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 A6NJR5 290 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 PARNO95453 639 aaKnown RBP12.02□□□□□ -0.49
CDCA3-208ENST00000540683 BEX3Q00994 111 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 LAMC2Q13753 1193 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 XRRA1Q6P2D8 792 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 CYB5R4Q7L1T6 521 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 CCDC136Q96JN2 1154 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 SPZ1Q9BXG8 430 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 HIPK3Q9H422 1215 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 PDGFCQ9NRA1 345 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 NOD1Q9Y239 953 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 SLC12A7Q9Y666 1083 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 ASTN1O14525 1302 aa12.02□□□□□ -0.49
CDCA3-208ENST00000540683 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-208ENST00000540683 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-208ENST00000540683 CTAGE5O15320 804 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 ADCY6O43306 1168 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 PRC1O43663 620 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 EIF5BO60841 1220 aaKnown RBP12.01□□□□□ -0.49
CDCA3-208ENST00000540683 CDC45O75419 566 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 CD4P01730 458 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 NR3C2P08235 984 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 MYL3P08590 195 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 CCND2P30279 289 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 RFC2P35250 354 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 PURAQ00577 322 aaKnown RBP12.01□□□□□ -0.49
CDCA3-208ENST00000540683 TROAPQ12815 778 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 BFSP2Q13515 415 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 SHHQ15465 462 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 DGKDQ16760 1214 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 STOX1Q6ZVD7 989 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 SH3RF1Q7Z6J0 888 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 MB21D2Q8IYB1 491 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-208ENST00000540683 ZNF654Q8IZM8 581 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 RETREG2Q8NC44 543 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 EMID1Q96A84 441 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-208ENST00000540683 LRCH3Q96II8 777 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 EHMT1Q9H9B1 1298 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 PXMP2Q9NR77 195 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 STXBP5LQ9Y2K9 1186 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 MRVI1Q9Y6F6 885 aa12.01□□□□□ -0.49
CDCA3-208ENST00000540683 SOX1O00570 391 aaPredicted RBP12□□□□□ -0.49
CDCA3-208ENST00000540683 ACTN1P12814 892 aa12□□□□□ -0.49
CDCA3-208ENST00000540683 SEPT14Q6ZU15 432 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms