RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 USP17L8P0C7I0 530 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 LETM2Q2VYF4 491 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 DYNLL2Q96FJ2 89 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 CCSER1Q9C0I3 900 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 FAM107BQ9H098 131 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 NDST4Q9H3R1 872 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 YY1AP1Q9H869 796 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 FTCDO95954 541 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 CALML3P27482 149 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 MECOMQ03112 1051 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 GBP6Q6ZN66 633 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 BRINP3Q76B58 766 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 DYMQ7RTS9 669 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 ZNF572Q7Z3I7 529 aaPredicted RBP15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 KANSL2Q9H9L4 492 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 NLRC4Q9NPP4 1024 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 USP17L3A6NCW0 530 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 USP17L4A6NCW7 530 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 CCNT1O60563 726 aaKnown RBP15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 PTPROQ16827 1216 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 VWA3BQ502W6 1294 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 USP17L1Q7RTZ2 530 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 NOC3LQ8WTT2 800 aaKnown RBP15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 PIK3R5Q8WYR1 880 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 ZNF804BA4D1E1 1349 aa15.44■□□□□ 0.06
SCNN1A-215ENST00000540037 A0A1W2PQJ5 194 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 TCP1P17987 556 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 PRDX5P30044 214 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 CDK17Q00537 523 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 TFAP4Q01664 338 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 ENOX2Q16206 610 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 EMBQ6PCB8 327 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 PNMA1Q8ND90 353 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 BICDL2A1A5D9 508 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 HEXIM1O94992 359 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 EPB41P11171 864 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 SKOR1P84550 965 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 LRRC41Q15345 812 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 CADPS2Q86UW7 1296 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 ALS2CR12Q96Q35 445 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 NCAPGQ9BPX3 1015 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 NIP7Q9Y221 180 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 LSP1P33241 339 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 IL6STP40189 918 aaPredicted RBP15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 PAFAH1B1P43034 410 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 ALS2CLQ60I27 953 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 DNAAF5Q86Y56 855 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 BAP1Q92560 729 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 CAVIN3Q969G5 261 aa15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 NSUN4Q96CB9 384 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 FAM84BQ96KN1 310 aaPredicted RBP15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 MMTAG2Q9BU76 263 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-215ENST00000540037 ORC4O43929 436 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 PRLRP16471 622 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 HNRNPH3P31942 346 aaKnown RBP15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 TDRD12Q587J7 1177 aaKnown RBP15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 FIGNQ5HY92 759 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 HOMEZQ8IX15 550 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 IQCKQ8N0W5 287 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 KRT12Q99456 494 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 GEMIN8Q9NWZ8 242 aaKnown RBP15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 MAD2L2Q9UI95 211 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 FNTAP49354 379 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 ITIH3Q06033 890 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 NAA35Q5VZE5 725 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 FAM114A1Q8IWE2 563 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 MCM9Q9NXL9 1143 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 TFCP2L1Q9NZI6 479 aa15.42■□□□□ 0.06
SCNN1A-215ENST00000540037 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 KIF5BP33176 963 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 ARID5AQ03989 594 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 CFAP58Q5T655 872 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 SLC44A5Q8NCS7 719 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 CASKIN2Q8WXE0 1202 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 CENPHQ9H3R5 247 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 TCP11L1Q9NUJ3 509 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 ITGB4P16144 1822 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 STXBP3O00186 592 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 PALMO75781 387 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 NTSR2O95665 410 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 HPDP32754 393 aaPredicted RBP15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 HDLBPQ00341 1268 aaKnown RBP15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 HGSNATQ68CP4 663 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 OTUD6BQ8N6M0 293 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 TANGO6Q9C0B7 1094 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 GOLPH3Q9H4A6 298 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 MYMKA6NI61 221 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 H0YHG0 523 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 LCA5LO95447 670 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 ASTE1Q2TB18 679 aaPredicted RBP15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 OR2W6PQ8NHA6 318 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 C7orf25Q9BPX7 421 aa15.41■□□□□ 0.06
SCNN1A-215ENST00000540037 A0A1B0GUL6 1792 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 BCL9O00512 1426 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 BACH1O14867 736 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 TLR2O60603 784 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 MYL1P05976 194 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 OR52Z1P0C646 297 aa15.4■□□□□ 0.06
SCNN1A-215ENST00000540037 CENPPQ6IPU0 288 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms