RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 FOSBP53539 338 aa14.93□□□□□ -0.02
CCDC42-202ENST00000539522 UBXN2AP68543 259 aa14.93□□□□□ -0.02
CCDC42-202ENST00000539522 CACNB2Q08289 660 aaPredicted RBP14.93□□□□□ -0.02
CCDC42-202ENST00000539522 FCHSD1Q86WN1 690 aa14.93□□□□□ -0.02
CCDC42-202ENST00000539522 ARMC5Q96C12 935 aa14.93□□□□□ -0.02
CCDC42-202ENST00000539522 ZFP91Q96JP5 570 aaPredicted RBP14.93□□□□□ -0.02
CCDC42-202ENST00000539522 TINF2Q9BSI4 451 aa14.93□□□□□ -0.02
CCDC42-202ENST00000539522 CWC22Q9HCG8 908 aaKnown RBP14.93□□□□□ -0.02
CCDC42-202ENST00000539522 PXMP2Q9NR77 195 aa14.93□□□□□ -0.02
CCDC42-202ENST00000539522 MAP3K20Q9NYL2 800 aaKnown RBP14.93□□□□□ -0.02
CCDC42-202ENST00000539522 POTEFA5A3E0 1075 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 FAM205CA6NFA0 338 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 INHAP05111 366 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 HSP90AA1P07900 732 aaKnown RBP14.92□□□□□ -0.02
CCDC42-202ENST00000539522 ZNF865P0CJ78 1059 aaPredicted RBP14.92□□□□□ -0.02
CCDC42-202ENST00000539522 CYBAP13498 195 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 EIF2AK2P19525 551 aaKnown RBP14.92□□□□□ -0.02
CCDC42-202ENST00000539522 GJB2P29033 226 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 CCND3P30281 292 aaPredicted RBP14.92□□□□□ -0.02
CCDC42-202ENST00000539522 ADCY7P51828 1080 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 MRPS9P82933 396 aaKnown RBP14.92□□□□□ -0.02
CCDC42-202ENST00000539522 AKAP17AQ02040 695 aaKnown RBP14.92□□□□□ -0.02
CCDC42-202ENST00000539522 TRAF1Q13077 416 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 ARHGEF6Q15052 776 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 MTFR1Q15390 333 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 PKN2Q16513 984 aaKnown RBP14.92□□□□□ -0.02
CCDC42-202ENST00000539522 ARMCX2Q7L311 632 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 SAMD3Q8N6K7 520 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 DAGLBQ8NCG7 672 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 SLAIN1Q8ND83 568 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 CUL5Q93034 780 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 ZNF333Q96JL9 665 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 RMDN3Q96TC7 470 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 PDCD2LQ9BRP1 358 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 BIN2Q9UBW5 565 aaPredicted RBP14.92□□□□□ -0.02
CCDC42-202ENST00000539522 PCDHA6Q9UN73 950 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 PCDHA8Q9Y5H6 950 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 DOCK5Q9H7D0 1870 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 SYNGAP1Q96PV0 1343 aa14.92□□□□□ -0.02
CCDC42-202ENST00000539522 HMGCRP04035 888 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 GUCY1B3Q02153 619 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 PGM5Q15124 567 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 JAKMIP3Q5VZ66 844 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 KRT40Q6A162 431 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 TAPT1Q6NXT6 567 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 DNERQ8NFT8 737 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 PDGFCQ9NRA1 345 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.91□□□□□ -0.02
CCDC42-202ENST00000539522 PCDHA4Q9UN74 947 aa14.91□□□□□ -0.02
CCDC42-202ENST00000539522 KIF28PB7ZC32 967 aa14.9□□□□□ -0.02
CCDC42-202ENST00000539522 WNT7AO00755 349 aa14.9□□□□□ -0.02
CCDC42-202ENST00000539522 MMP1P03956 469 aa14.9□□□□□ -0.02
CCDC42-202ENST00000539522 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
CCDC42-202ENST00000539522 HMGN5P82970 282 aaKnown RBP14.9□□□□□ -0.02
CCDC42-202ENST00000539522 NR5A1Q13285 461 aa14.9□□□□□ -0.02
CCDC42-202ENST00000539522 VSIG10LQ86VR7 867 aa14.9□□□□□ -0.02
CCDC42-202ENST00000539522 FBXO16Q8IX29 292 aaPredicted RBP14.9□□□□□ -0.02
CCDC42-202ENST00000539522 FBXO18Q8NFZ0 1043 aa14.9□□□□□ -0.02
CCDC42-202ENST00000539522 ANO3Q9BYT9 981 aa14.9□□□□□ -0.02
CCDC42-202ENST00000539522 UNC93B1Q9H1C4 597 aa14.9□□□□□ -0.02
CCDC42-202ENST00000539522 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.89□□□□□ -0.03
CCDC42-202ENST00000539522 NR3C2P08235 984 aa14.89□□□□□ -0.03
CCDC42-202ENST00000539522 MRPL12P52815 198 aaKnown RBP14.89□□□□□ -0.03
CCDC42-202ENST00000539522 NLRP5P59047 1200 aa14.89□□□□□ -0.03
CCDC42-202ENST00000539522 SEMA3FQ13275 785 aa14.89□□□□□ -0.03
CCDC42-202ENST00000539522 SLC9C1Q4G0N8 1177 aa14.89□□□□□ -0.03
CCDC42-202ENST00000539522 BLIDQ8IZY5 108 aa14.89□□□□□ -0.03
CCDC42-202ENST00000539522 FAM177A1Q8N128 213 aaPredicted RBP14.89□□□□□ -0.03
CCDC42-202ENST00000539522 MSL3Q8N5Y2 521 aaKnown RBP14.89□□□□□ -0.03
CCDC42-202ENST00000539522 CCDC148Q8NFR7 591 aa14.89□□□□□ -0.03
CCDC42-202ENST00000539522 NSUN6Q8TEA1 469 aaKnown RBP14.89□□□□□ -0.03
CCDC42-202ENST00000539522 LENG1Q96BZ8 264 aaPredicted RBP14.89□□□□□ -0.03
CCDC42-202ENST00000539522 INTS4Q96HW7 963 aaKnown RBP14.89□□□□□ -0.03
CCDC42-202ENST00000539522 C6orf50Q9HD87 102 aa14.89□□□□□ -0.03
CCDC42-202ENST00000539522 MKI67P46013 3256 aaKnown RBP14.88□□□□□ -0.03
CCDC42-202ENST00000539522 RBM47A0AV96 593 aaKnown RBP14.88□□□□□ -0.03
CCDC42-202ENST00000539522 BTBD18B2RXH4 712 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 ARIH2O95376 493 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 ITGB5P18084 799 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 SREBF1P36956 1147 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 IRX5P78411 483 aaPredicted RBP14.88□□□□□ -0.03
CCDC42-202ENST00000539522 ARHGEF16Q5VV41 709 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 LHX8Q68G74 356 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 EEPD1Q7L9B9 569 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 TRMT44Q8IYL2 757 aaKnown RBP14.88□□□□□ -0.03
CCDC42-202ENST00000539522 REXO1Q8N1G1 1221 aaKnown RBP14.88□□□□□ -0.03
CCDC42-202ENST00000539522 SPRYD3Q8NCJ5 442 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 CYP2W1Q8TAV3 490 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 WASF1Q92558 559 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 BCAS3Q9H6U6 928 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 PAK6Q9NQU5 681 aaPredicted RBP14.88□□□□□ -0.03
CCDC42-202ENST00000539522 SLC5A4Q9NY91 659 aa14.88□□□□□ -0.03
CCDC42-202ENST00000539522 ADD3Q9UEY8 706 aaKnown RBP14.88□□□□□ -0.03
CCDC42-202ENST00000539522 LOC102724159A0A0B4J2E5 919 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 ASB14A6NK59 587 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 MYCP01106 439 aaPredicted RBP14.87□□□□□ -0.03
CCDC42-202ENST00000539522 GNA11P29992 359 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 AP3B2Q13367 1082 aa14.87□□□□□ -0.03
CCDC42-202ENST00000539522 ACVR2BQ13705 512 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms