RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ZNF296Q8WUU4 475 aaPredicted RBP26.86■■□□□ 1.89
TMEM260-202ENST00000538838 CHMP5Q9NZZ3 219 aa26.86■■□□□ 1.89
TMEM260-202ENST00000538838 ASTN1O14525 1302 aa26.86■■□□□ 1.89
TMEM260-202ENST00000538838 UBXN2AP68543 259 aa26.85■■□□□ 1.89
TMEM260-202ENST00000538838 KIF22Q14807 665 aa26.85■■□□□ 1.89
TMEM260-202ENST00000538838 NONOQ15233 471 aaKnown RBP eCLIP26.85■■□□□ 1.89
TMEM260-202ENST00000538838 FAM133AQ8N9E0 248 aa26.85■■□□□ 1.89
TMEM260-202ENST00000538838 MCM3APO60318 1980 aa26.85■■□□□ 1.89
TMEM260-202ENST00000538838 COBLO75128 1261 aa26.84■■□□□ 1.89
TMEM260-202ENST00000538838 MORN1Q5T089 497 aa26.84■■□□□ 1.89
TMEM260-202ENST00000538838 MCTP2Q6DN12 878 aa26.84■■□□□ 1.89
TMEM260-202ENST00000538838 FGD4Q96M96 766 aa26.84■■□□□ 1.89
TMEM260-202ENST00000538838 RMDN3Q96TC7 470 aa26.84■■□□□ 1.89
TMEM260-202ENST00000538838 FRMPD4Q14CM0 1322 aa26.84■■□□□ 1.89
TMEM260-202ENST00000538838 SOWAHBA6NEL2 793 aa26.83■■□□□ 1.89
TMEM260-202ENST00000538838 FKTNO75072 461 aa26.83■■□□□ 1.89
TMEM260-202ENST00000538838 EIF2AK2P19525 551 aaKnown RBP26.83■■□□□ 1.89
TMEM260-202ENST00000538838 INF2Q27J81 1249 aa26.83■■□□□ 1.89
TMEM260-202ENST00000538838 BRAPQ7Z569 592 aa26.83■■□□□ 1.89
TMEM260-202ENST00000538838 PXMP2Q9NR77 195 aa26.83■■□□□ 1.89
TMEM260-202ENST00000538838 RPTORQ8N122 1335 aa26.83■■□□□ 1.89
TMEM260-202ENST00000538838 FAM173BQ6P4H8 233 aa26.83■■□□□ 1.88
TMEM260-202ENST00000538838 TBCKQ8TEA7 893 aa26.83■■□□□ 1.88
TMEM260-202ENST00000538838 ZSCAN16Q9H4T2 348 aaPredicted RBP26.83■■□□□ 1.88
TMEM260-202ENST00000538838 DDX49Q9Y6V7 483 aaKnown RBP26.83■■□□□ 1.88
TMEM260-202ENST00000538838 CASP8AP2Q9UKL3 1982 aa26.82■■□□□ 1.88
TMEM260-202ENST00000538838 SREBF1P36956 1147 aa26.82■■□□□ 1.88
TMEM260-202ENST00000538838 ARHGEF16Q5VV41 709 aa26.82■■□□□ 1.88
TMEM260-202ENST00000538838 IL31RAQ8NI17 732 aa26.82■■□□□ 1.88
TMEM260-202ENST00000538838 EHMT1Q9H9B1 1298 aa26.82■■□□□ 1.88
TMEM260-202ENST00000538838 ALDH5A1P51649 535 aaPredicted RBP26.81■■□□□ 1.88
TMEM260-202ENST00000538838 MAP2K5Q13163 448 aa26.81■■□□□ 1.88
TMEM260-202ENST00000538838 ZNF792Q3KQV3 632 aa26.81■■□□□ 1.88
TMEM260-202ENST00000538838 DPP9Q86TI2 863 aa26.81■■□□□ 1.88
TMEM260-202ENST00000538838 SOCS4Q8WXH5 440 aa26.81■■□□□ 1.88
TMEM260-202ENST00000538838 ERO1AQ96HE7 468 aa26.81■■□□□ 1.88
TMEM260-202ENST00000538838 NUDT12Q9BQG2 462 aa26.81■■□□□ 1.88
TMEM260-202ENST00000538838 ARHGAP4P98171 946 aa26.8■■□□□ 1.88
TMEM260-202ENST00000538838 FOXD4L6Q3SYB3 417 aaPredicted RBP26.8■■□□□ 1.88
TMEM260-202ENST00000538838 FOXD4L3Q6VB84 417 aaPredicted RBP26.8■■□□□ 1.88
TMEM260-202ENST00000538838 DNERQ8NFT8 737 aa26.8■■□□□ 1.88
TMEM260-202ENST00000538838 NSUN6Q8TEA1 469 aaKnown RBP26.8■■□□□ 1.88
TMEM260-202ENST00000538838 USP6NLQ92738 828 aa26.8■■□□□ 1.88
TMEM260-202ENST00000538838 PDCD2LQ9BRP1 358 aa26.8■■□□□ 1.88
TMEM260-202ENST00000538838 ADD3Q9UEY8 706 aaKnown RBP26.8■■□□□ 1.88
TMEM260-202ENST00000538838 GJD2Q9UKL4 321 aa26.8■■□□□ 1.88
TMEM260-202ENST00000538838 PGM5Q15124 567 aa26.79■■□□□ 1.88
TMEM260-202ENST00000538838 MYSM1Q5VVJ2 828 aa26.79■■□□□ 1.88
TMEM260-202ENST00000538838 NPLOC4Q8TAT6 608 aa26.79■■□□□ 1.88
TMEM260-202ENST00000538838 CRYGNQ8WXF5 182 aa26.79■■□□□ 1.88
TMEM260-202ENST00000538838 GABRQQ9UN88 632 aa26.79■■□□□ 1.88
TMEM260-202ENST00000538838 WNT7AO00755 349 aa26.79■■□□□ 1.88
TMEM260-202ENST00000538838 NEK8Q86SG6 692 aa26.79■■□□□ 1.88
TMEM260-202ENST00000538838 EDIL3O43854 480 aa26.78■■□□□ 1.88
TMEM260-202ENST00000538838 ATP2B1P20020 1258 aa26.78■■□□□ 1.88
TMEM260-202ENST00000538838 RGS2P41220 211 aa26.78■■□□□ 1.88
TMEM260-202ENST00000538838 PRKCZQ05513 592 aa26.78■■□□□ 1.88
TMEM260-202ENST00000538838 NBR1Q14596 966 aa26.78■■□□□ 1.88
TMEM260-202ENST00000538838 NOL7Q9UMY1 257 aaKnown RBP26.78■■□□□ 1.88
TMEM260-202ENST00000538838 TCHHQ07283 1943 aa26.77■■□□□ 1.88
TMEM260-202ENST00000538838 CYP2B6P20813 491 aa26.77■■□□□ 1.88
TMEM260-202ENST00000538838 TOB1P50616 345 aaPredicted RBP26.77■■□□□ 1.88
TMEM260-202ENST00000538838 LETM2Q2VYF4 491 aa26.77■■□□□ 1.88
TMEM260-202ENST00000538838 MAML3Q96JK9 1138 aa26.77■■□□□ 1.88
TMEM260-202ENST00000538838 ZFP91Q96JP5 570 aaPredicted RBP26.77■■□□□ 1.88
TMEM260-202ENST00000538838 APBA2Q99767 749 aa26.77■■□□□ 1.88
TMEM260-202ENST00000538838 KIAA1217Q5T5P2 1943 aa26.77■■□□□ 1.88
TMEM260-202ENST00000538838 FOXN1O15353 648 aa26.76■■□□□ 1.87
TMEM260-202ENST00000538838 NR3C2P08235 984 aa26.76■■□□□ 1.87
TMEM260-202ENST00000538838 MYCLP12524 364 aaPredicted RBP26.76■■□□□ 1.87
TMEM260-202ENST00000538838 PCNX4Q63HM2 1172 aa26.76■■□□□ 1.87
TMEM260-202ENST00000538838 CHAMP1Q96JM3 812 aa26.76■■□□□ 1.87
TMEM260-202ENST00000538838 SLC5A4Q9NY91 659 aa26.76■■□□□ 1.87
TMEM260-202ENST00000538838 DIS3Q9Y2L1 958 aaKnown RBP26.76■■□□□ 1.87
TMEM260-202ENST00000538838 HOXC6P09630 235 aa26.76■■□□□ 1.87
TMEM260-202ENST00000538838 HSPA1AP0DMV8 641 aaKnown RBP26.76■■□□□ 1.87
TMEM260-202ENST00000538838 HSPA1BP0DMV9 641 aaKnown RBP26.76■■□□□ 1.87
TMEM260-202ENST00000538838 FLT3LGP49771 235 aa26.76■■□□□ 1.87
TMEM260-202ENST00000538838 RILPL1Q5EBL4 403 aa26.76■■□□□ 1.87
TMEM260-202ENST00000538838 TDP2O95551 362 aa26.75■■□□□ 1.87
TMEM260-202ENST00000538838 HSPA8P11142 646 aaKnown RBP26.75■■□□□ 1.87
TMEM260-202ENST00000538838 EDNRBP24530 442 aa26.75■■□□□ 1.87
TMEM260-202ENST00000538838 CCND2P30279 289 aa26.75■■□□□ 1.87
TMEM260-202ENST00000538838 MRPS9P82933 396 aaKnown RBP26.75■■□□□ 1.87
TMEM260-202ENST00000538838 TTC38Q5R3I4 469 aa26.75■■□□□ 1.87
TMEM260-202ENST00000538838 IWS1Q96ST2 819 aa26.75■■□□□ 1.87
TMEM260-202ENST00000538838 FTOQ9C0B1 505 aaKnown RBP eCLIP26.75■■□□□ 1.87
TMEM260-202ENST00000538838 CYP3A4P08684 503 aa26.74■■□□□ 1.87
TMEM260-202ENST00000538838 TRAPPC10P48553 1259 aa26.74■■□□□ 1.87
TMEM260-202ENST00000538838 CCL14Q16627 93 aa26.74■■□□□ 1.87
TMEM260-202ENST00000538838 ZNF467Q7Z7K2 595 aaPredicted RBP26.74■■□□□ 1.87
TMEM260-202ENST00000538838 SRRDQ9UH36 339 aa26.74■■□□□ 1.87
TMEM260-202ENST00000538838 PCDHB6Q9Y5E3 794 aa26.74■■□□□ 1.87
TMEM260-202ENST00000538838 CCNT1O60563 726 aaKnown RBP26.73■■□□□ 1.87
TMEM260-202ENST00000538838 USP11P51784 963 aa26.73■■□□□ 1.87
TMEM260-202ENST00000538838 VSIG10LQ86VR7 867 aa26.73■■□□□ 1.87
TMEM260-202ENST00000538838 FLRT1Q9NZU1 646 aa26.73■■□□□ 1.87
TMEM260-202ENST00000538838 ASB14A6NK59 587 aa26.72■■□□□ 1.87
TMEM260-202ENST00000538838 DNM1Q05193 864 aaKnown RBP26.72■■□□□ 1.87
TMEM260-202ENST00000538838 PDE4DQ08499 809 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms