RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PIK3CDO00329 1044 aa15.08■□□□□ 0
CHFR-216ENST00000538235 ARIH2O95376 493 aa15.08■□□□□ 0
CHFR-216ENST00000538235 FOSBP53539 338 aa15.08■□□□□ 0
CHFR-216ENST00000538235 NAPAP54920 295 aa15.08■□□□□ 0
CHFR-216ENST00000538235 TAPT1Q6NXT6 567 aa15.08■□□□□ 0
CHFR-216ENST00000538235 FCHSD1Q86WN1 690 aa15.08■□□□□ 0
CHFR-216ENST00000538235 SMARCC2Q8TAQ2 1214 aa15.08■□□□□ 0
CHFR-216ENST00000538235 PDCD2LQ9BRP1 358 aa15.08■□□□□ 0
CHFR-216ENST00000538235 BIN2Q9UBW5 565 aaPredicted RBP15.08■□□□□ 0
CHFR-216ENST00000538235 PNMA2Q9UL42 364 aa15.08■□□□□ 0
CHFR-216ENST00000538235 MYADML2A6NDP7 307 aa15.07■□□□□ 0
CHFR-216ENST00000538235 GCOM1H8Y6P7 765 aaPredicted RBP15.07■□□□□ 0
CHFR-216ENST00000538235 POLR2MP0CAP2 368 aa15.07■□□□□ 0
CHFR-216ENST00000538235 EN2P19622 333 aaPredicted RBP15.07■□□□□ 0
CHFR-216ENST00000538235 MRPS9P82933 396 aaKnown RBP15.07■□□□□ 0
CHFR-216ENST00000538235 PGM5Q15124 567 aa15.07■□□□□ 0
CHFR-216ENST00000538235 PPP1R18Q6NYC8 613 aa15.07■□□□□ 0
CHFR-216ENST00000538235 DEFB118Q96PH6 123 aa15.07■□□□□ 0
CHFR-216ENST00000538235 RNF208Q9H0X6 261 aa15.07■□□□□ 0
CHFR-216ENST00000538235 RIC8AQ9NPQ8 531 aa15.07■□□□□ 0
CHFR-216ENST00000538235 ZHX1Q9UKY1 873 aaPredicted RBP15.07■□□□□ 0
CHFR-216ENST00000538235 KCNJ14Q9UNX9 436 aa15.07■□□□□ 0
CHFR-216ENST00000538235 MYH15Q9Y2K3 1946 aa15.06■□□□□ 0
CHFR-216ENST00000538235 ESYT2A0FGR8 921 aa15.06■□□□□ 0
CHFR-216ENST00000538235 FAM205CA6NFA0 338 aa15.06■□□□□ 0
CHFR-216ENST00000538235 CCDC85CA6NKD9 419 aa15.06■□□□□ 0
CHFR-216ENST00000538235 M0R2N6 131 aa15.06■□□□□ 0
CHFR-216ENST00000538235 CPLX1O14810 134 aa15.06■□□□□ 0
CHFR-216ENST00000538235 CTAGE5O15320 804 aa15.06■□□□□ 0
CHFR-216ENST00000538235 DEXIO95424 95 aa15.06■□□□□ 0
CHFR-216ENST00000538235 ADCYAP1R1P41586 468 aa15.06■□□□□ 0
CHFR-216ENST00000538235 SSRP1Q08945 709 aaKnown RBP15.06■□□□□ 0
CHFR-216ENST00000538235 SEMA3FQ13275 785 aa15.06■□□□□ 0
CHFR-216ENST00000538235 MFSD14CQ5VZR4 134 aa15.06■□□□□ 0
CHFR-216ENST00000538235 MCF2L2Q86YR7 1114 aa15.06■□□□□ 0
CHFR-216ENST00000538235 TRMT44Q8IYL2 757 aaKnown RBP15.06■□□□□ 0
CHFR-216ENST00000538235 OXER1Q8TDS5 423 aa15.06■□□□□ 0
CHFR-216ENST00000538235 DIS3LQ8TF46 1054 aaKnown RBP15.06■□□□□ 0
CHFR-216ENST00000538235 RMDN3Q96TC7 470 aa15.06■□□□□ 0
CHFR-216ENST00000538235 CRISPLD2Q9H0B8 497 aa15.06■□□□□ 0
CHFR-216ENST00000538235 ZMYND12Q9H0C1 365 aa15.06■□□□□ 0
CHFR-216ENST00000538235 ORC3Q9UBD5 711 aaPredicted RBP15.06■□□□□ 0
CHFR-216ENST00000538235 TELO2Q9Y4R8 837 aa15.06■□□□□ 0
CHFR-216ENST00000538235 DNAH12Q6ZR08 3092 aa15.06■□□□□ 0
CHFR-216ENST00000538235 SMCO2A6NFE2 343 aa15.05■□□□□ -0
CHFR-216ENST00000538235 ADCY7P51828 1080 aa15.05■□□□□ -0
CHFR-216ENST00000538235 ACVR2BQ13705 512 aa15.05■□□□□ -0
CHFR-216ENST00000538235 EARS2Q5JPH6 523 aaKnown RBP15.05■□□□□ -0
CHFR-216ENST00000538235 MSL3Q8N5Y2 521 aaKnown RBP15.05■□□□□ -0
CHFR-216ENST00000538235 DNERQ8NFT8 737 aa15.05■□□□□ -0
CHFR-216ENST00000538235 U2AF1L4Q8WU68 220 aaKnown RBP15.05■□□□□ -0
CHFR-216ENST00000538235 CRYGNQ8WXF5 182 aa15.05■□□□□ -0
CHFR-216ENST00000538235 COPS5Q92905 334 aa15.05■□□□□ -0
CHFR-216ENST00000538235 BCAS3Q9H6U6 928 aa15.05■□□□□ -0
CHFR-216ENST00000538235 PSTPIP2Q9H939 334 aa15.05■□□□□ -0
CHFR-216ENST00000538235 HMX1Q9NP08 348 aaPredicted RBP15.05■□□□□ -0
CHFR-216ENST00000538235 DDX20Q9UHI6 824 aaKnown RBP15.05■□□□□ -0
CHFR-216ENST00000538235 hCG_1984214I3L0E3 225 aa15.04■□□□□ -0
CHFR-216ENST00000538235 SEPT4O43236 478 aa15.04■□□□□ -0
CHFR-216ENST00000538235 CAPN15O75808 1086 aa15.04■□□□□ -0
CHFR-216ENST00000538235 GJB1P08034 283 aa15.04■□□□□ -0
CHFR-216ENST00000538235 NR3C2P08235 984 aa15.04■□□□□ -0
CHFR-216ENST00000538235 SMPD1P17405 629 aa15.04■□□□□ -0
CHFR-216ENST00000538235 CCDC144BQ3MJ40 725 aa15.04■□□□□ -0
CHFR-216ENST00000538235 JAKMIP3Q5VZ66 844 aa15.04■□□□□ -0
CHFR-216ENST00000538235 UBE2Q1Q7Z7E8 422 aa15.04■□□□□ -0
CHFR-216ENST00000538235 ZNF713Q8N859 430 aaPredicted RBP15.04■□□□□ -0
CHFR-216ENST00000538235 PHF20Q9BVI0 1012 aa15.04■□□□□ -0
CHFR-216ENST00000538235 ANO3Q9BYT9 981 aa15.04■□□□□ -0
CHFR-216ENST00000538235 SLC5A4Q9NY91 659 aa15.04■□□□□ -0
CHFR-216ENST00000538235 PCDH10Q9P2E7 1040 aa15.04■□□□□ -0
CHFR-216ENST00000538235 PCDHA6Q9UN73 950 aa15.04■□□□□ -0
CHFR-216ENST00000538235 PCDHA8Q9Y5H6 950 aa15.04■□□□□ -0
CHFR-216ENST00000538235 SYNRGQ9UMZ2 1314 aa15.03■□□□□ -0
CHFR-216ENST00000538235 RBM47A0AV96 593 aaKnown RBP15.03■□□□□ -0
CHFR-216ENST00000538235 ASB14A6NK59 587 aa15.03■□□□□ -0
CHFR-216ENST00000538235 WNT7AO00755 349 aa15.03■□□□□ -0
CHFR-216ENST00000538235 ST18O60284 1047 aa15.03■□□□□ -0
CHFR-216ENST00000538235 ADAMTS4O75173 837 aa15.03■□□□□ -0
CHFR-216ENST00000538235 GJA8P48165 433 aa15.03■□□□□ -0
CHFR-216ENST00000538235 ARHGEF16Q5VV41 709 aa15.03■□□□□ -0
CHFR-216ENST00000538235 TRIM22Q8IYM9 498 aa15.03■□□□□ -0
CHFR-216ENST00000538235 NSUN6Q8TEA1 469 aaKnown RBP15.03■□□□□ -0
CHFR-216ENST00000538235 CUL5Q93034 780 aa15.03■□□□□ -0
CHFR-216ENST00000538235 TNFRSF25Q93038 417 aa15.03■□□□□ -0
CHFR-216ENST00000538235 ZSCAN31Q96LW9 406 aaPredicted RBP15.03■□□□□ -0
CHFR-216ENST00000538235 ALG1Q9BT22 464 aa15.03■□□□□ -0
CHFR-216ENST00000538235 MAF1Q9H063 256 aa15.03■□□□□ -0
CHFR-216ENST00000538235 SH2B1Q9NRF2 756 aaPredicted RBP15.03■□□□□ -0
CHFR-216ENST00000538235 ADD3Q9UEY8 706 aaKnown RBP15.03■□□□□ -0
CHFR-216ENST00000538235 OGDHLQ9ULD0 1010 aa15.03■□□□□ -0
CHFR-216ENST00000538235 GNEQ9Y223 722 aaKnown RBP15.03■□□□□ -0
CHFR-216ENST00000538235 SCN10AQ9Y5Y9 1956 aa15.03■□□□□ -0
CHFR-216ENST00000538235 RBAK-RBAKDNI3L0D1 243 aa15.02■□□□□ -0
CHFR-216ENST00000538235 SGPL1O95470 568 aa15.02■□□□□ -0
CHFR-216ENST00000538235 MYCLP12524 364 aaPredicted RBP15.02■□□□□ -0
CHFR-216ENST00000538235 CNGA1P29973 690 aa15.02■□□□□ -0
CHFR-216ENST00000538235 GUCY1B3Q02153 619 aa15.02■□□□□ -0
CHFR-216ENST00000538235 CUL4AQ13619 759 aa15.02■□□□□ -0
CHFR-216ENST00000538235 CCDC62Q6P9F0 684 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms