RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 KLF18A0A0U1RQI7 1052 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 A0A1W2PQ45 241 aaPredicted RBP9.74□□□□□ -0.85
SPARC-208ENST00000538026 A0A1W2PQY0 241 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 RBAK-RBAKDNI3L0D1 243 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 MEIS2O14770 477 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 DYNC1LI2O43237 492 aaPredicted RBP9.74□□□□□ -0.85
SPARC-208ENST00000538026 EPB41L2O43491 1005 aaKnown RBP9.74□□□□□ -0.85
SPARC-208ENST00000538026 REC8O95072 547 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 CFBP00751 764 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 MYCNP04198 464 aaPredicted RBP9.74□□□□□ -0.85
SPARC-208ENST00000538026 SYN1P17600 705 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 ITGB8P26012 769 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 CST5P28325 142 aaPredicted RBP9.74□□□□□ -0.85
SPARC-208ENST00000538026 CDK7P50613 346 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 ACLYP53396 1101 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 EVCP57679 992 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 RTP1P59025 263 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 KRT32Q14532 448 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 PWP2Q15269 919 aaKnown RBP9.74□□□□□ -0.85
SPARC-208ENST00000538026 DUSP28Q4G0W2 176 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 CTCFLQ8NI51 663 aaPredicted RBP9.74□□□□□ -0.85
SPARC-208ENST00000538026 GPKOWQ92917 476 aaPredicted RBP eCLIP9.74□□□□□ -0.85
SPARC-208ENST00000538026 RMDN3Q96TC7 470 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
SPARC-208ENST00000538026 MAF1Q9H063 256 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 BCAS3Q9H6U6 928 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 ADD3Q9UEY8 706 aaKnown RBP9.74□□□□□ -0.85
SPARC-208ENST00000538026 CNTNAP5Q8WYK1 1306 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 LTBP2Q14767 1821 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 VCANP13611 3396 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 TRIM43BA6NCK2 446 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 KBTBD13C9JR72 458 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 ZBTB43O43298 467 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 ASGR1P07306 291 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 NR3C2P08235 984 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 EIF2AK2P19525 551 aaKnown RBP9.73□□□□□ -0.85
SPARC-208ENST00000538026 CASTP20810 708 aaKnown RBP9.73□□□□□ -0.85
SPARC-208ENST00000538026 KIF5BP33176 963 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 MRPS9P82933 396 aaKnown RBP9.73□□□□□ -0.85
SPARC-208ENST00000538026 TLE2Q04725 743 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 NTRK3Q16288 839 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 TRIM60Q495X7 471 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 C1orf53Q5VUE5 145 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 USP17L6PQ6QN14 398 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 RNF180Q86T96 592 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 VSIG10LQ86VR7 867 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 MCF2L2Q86YR7 1114 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 BRF1Q92994 677 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 TRIM43Q96BQ3 446 aaPredicted RBP9.73□□□□□ -0.85
SPARC-208ENST00000538026 IL17RAQ96F46 866 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 GDF15Q99988 308 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 LZTS2Q9BRK4 669 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 PDCD2LQ9BRP1 358 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 TSEN34Q9BSV6 310 aaKnown RBP9.73□□□□□ -0.85
SPARC-208ENST00000538026 WDR11Q9BZH6 1224 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 RBM27Q9P2N5 1060 aaKnown RBP9.73□□□□□ -0.85
SPARC-208ENST00000538026 TELO2Q9Y4R8 837 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 TRIP12Q14669 1992 aaPredicted RBP9.73□□□□□ -0.85
SPARC-208ENST00000538026 FRMPD4Q14CM0 1322 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 NID2Q14112 1375 aa9.73□□□□□ -0.85
SPARC-208ENST00000538026 TRANK1O15050 2925 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 DTNBO60941 627 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 PPFIA3O75145 1194 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 HMGB1P09429 215 aaKnown RBP9.72□□□□□ -0.85
SPARC-208ENST00000538026 C6orf222P0C671 652 aaPredicted RBP9.72□□□□□ -0.85
SPARC-208ENST00000538026 CALM1P0DP23 149 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 CALM2P0DP24 149 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 CALM3P0DP25 149 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 PDIA3P30101 505 aaKnown RBP9.72□□□□□ -0.85
SPARC-208ENST00000538026 GNAQP50148 359 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 SP2Q02086 613 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 PDE4DQ08499 809 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 SEMA3FQ13275 785 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 PKN1Q16512 942 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 FSCN1Q16658 493 aaKnown RBP9.72□□□□□ -0.85
SPARC-208ENST00000538026 RTN1Q16799 776 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 LY6KQ17RY6 165 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 GNASQ5JWF2 1037 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 WWC2Q6AWC2 1192 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 BLOC1S2Q6QNY1 142 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 CXCL17Q6UXB2 119 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 CHRDL2Q6WN34 429 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 RUFY3Q7L099 469 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 TLK2Q86UE8 772 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 SLC43A3Q8NBI5 491 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 NSUN6Q8TEA1 469 aaKnown RBP9.72□□□□□ -0.85
SPARC-208ENST00000538026 PPP1R13LQ8WUF5 828 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 RRP36Q96EU6 259 aaKnown RBP9.72□□□□□ -0.85
SPARC-208ENST00000538026 IWS1Q96ST2 819 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 UPF3BQ9BZI7 483 aaKnown RBP9.72□□□□□ -0.85
SPARC-208ENST00000538026 TM6SF1Q9BZW5 370 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 DDX41Q9UJV9 622 aaKnown RBP9.72□□□□□ -0.85
SPARC-208ENST00000538026 Q9Y3F1 56 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 NR2E3Q9Y5X4 410 aa9.72□□□□□ -0.85
SPARC-208ENST00000538026 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
SPARC-208ENST00000538026 MOXD2PA6NHM9 499 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 GOLGA8AA7E2F4 631 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 GOLGA8BA8MQT2 603 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 GCOM1H8Y6P7 765 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms