RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 CCT6AP40227 531 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 UBE4AQ14139 1066 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 KRT31Q15323 416 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 KLHL10Q6JEL2 608 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 STK11IPQ8N1F8 1099 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 ARFGAP2Q8N6H7 521 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 SPATA4Q8NEY3 305 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 CCHCR1Q8TD31 782 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 TBC1D31Q96DN5 1066 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 STAMBPL1Q96FJ0 436 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 NUP58Q9BVL2 599 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 KDM4CQ9H3R0 1056 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 POLD4Q9HCU8 107 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 PPANQ9NQ55 473 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 ANKRD31Q8N7Z5 1873 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 LIN7AO14910 233 aaPredicted RBP12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 CAND2O75155 1236 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 IDH1O75874 414 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 SLC7A5Q01650 507 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 MYO1EQ12965 1108 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 ZMYM1Q5SVZ6 1142 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 OSBP2Q969R2 916 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 CCDC43Q96MW1 224 aaKnown RBP12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 PLCD4Q9BRC7 762 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 SNX12Q9UMY4 172 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 MAST3O60307 1309 aa12.57□□□□□ -0.4
SEMA4D-221ENST00000537934 C5orf60A6NFR6 353 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 M0R2C6 588 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 FESP07332 822 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 PRLRP16471 622 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 PTPREP23469 700 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 BAG6P46379 1132 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 VAV2P52735 878 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 RIPK1Q13546 671 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 ARMC9Q7Z3E5 817 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 TICAM2Q86XR7 235 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 MREGQ8N565 214 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 TRIM58Q8NG06 486 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 SEC16BQ96JE7 1060 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 PURBQ96QR8 312 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 STK32BQ9NY57 414 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 BAIAP2L1Q9UHR4 511 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 LEMD3Q9Y2U8 911 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 SH2B2O14492 632 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 AHCYL1O43865 530 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 ANP32DO95626 131 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 WASHC4Q2M389 1173 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 PIK3R5Q8WYR1 880 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 AIFM3Q96NN9 605 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 FBXO2Q9UK22 296 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 TFR2Q9UP52 801 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 MYH7P12883 1935 aa12.56□□□□□ -0.4
SEMA4D-221ENST00000537934 TRAPPC3O43617 180 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 SNX1Q13596 522 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 CACNA2D3Q8IZS8 1091 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 DRAXINQ8NBI3 349 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 CCT6BQ92526 530 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 HVCN1Q96D96 273 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 FAM84BQ96KN1 310 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 GPR101Q96P66 508 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 DNAJC7Q99615 494 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 PUS7LQ9H0K6 701 aaKnown RBP12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 ANKIB1Q9P2G1 1089 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 COL1A1P02452 1464 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 PPIP5K2O43314 1243 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 PRC1O43663 620 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 COPB1P53618 953 aaKnown RBP12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 SPAG1Q07617 926 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 OSBPL9Q96SU4 736 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 ANKRD2Q9GZV1 360 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 VPS16Q9H269 839 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 ZNF804BA4D1E1 1349 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 NRXN2Q9P2S2 1712 aa12.55□□□□□ -0.4
SEMA4D-221ENST00000537934 GRIN1Q05586 938 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 THEMIS2Q5TEJ8 643 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 KLRG2A4D1S0 409 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 CDKL5O76039 1030 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 TTF1Q15361 905 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 QPCTQ16769 361 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 TSR1Q2NL82 804 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 CAVIN4Q5BKX8 364 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 HIBCHQ6NVY1 386 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 RAB11FIP4Q86YS3 637 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 HOMEZQ8IX15 550 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 RBM17Q96I25 401 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 BRIP1Q9BX63 1249 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 LACRTQ9GZZ8 138 aa12.54□□□□□ -0.4
SEMA4D-221ENST00000537934 TTC26A0AVF1 554 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 RTN3O95197 1032 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 ADD2P35612 726 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 CYLC1P35663 651 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 TBC1D25Q3MII6 688 aa12.53□□□□□ -0.4
SEMA4D-221ENST00000537934 CCDC181Q5TID7 509 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms