RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 RGS22Q8NE09 1264 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 HERVK_113Q902F9 699 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 PBX4Q9BYU1 374 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 MAF1Q9H063 256 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 WNT8AQ9H1J5 351 aa11.31□□□□□ -0.6
CHD4-207ENST00000537634 GBF1Q92538 1859 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 GRXCR1A8MXD5 290 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 KPNA6O60684 536 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 HOXD11P31277 338 aaPredicted RBP11.3□□□□□ -0.6
CHD4-207ENST00000537634 PBX2P40425 430 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 QRICH1Q2TAL8 776 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 IFIT1BQ5T764 474 aaKnown RBP11.3□□□□□ -0.6
CHD4-207ENST00000537634 OTOP2Q7RTS6 562 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 FBXO11Q86XK2 927 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
CHD4-207ENST00000537634 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
CHD4-207ENST00000537634 COPS5Q92905 334 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 COL25A1Q9BXS0 654 aaPredicted RBP11.3□□□□□ -0.6
CHD4-207ENST00000537634 TRMT13Q9NUP7 481 aaKnown RBP11.3□□□□□ -0.6
CHD4-207ENST00000537634 MSRAQ9UJ68 235 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 MRPL11Q9Y3B7 192 aaKnown RBP11.3□□□□□ -0.6
CHD4-207ENST00000537634 CUL9Q8IWT3 2517 aa11.3□□□□□ -0.6
CHD4-207ENST00000537634 KIAA1217Q5T5P2 1943 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 A6NJR5 290 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 CYP2C9P11712 490 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 TRDNQ13061 729 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 NBPF20Q3BBV1 942 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 TTC22Q5TAA0 569 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 NFRKBQ6P4R8 1299 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 SEPT14Q6ZU15 432 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 SYTL5Q8TDW5 730 aaPredicted RBP11.29□□□□□ -0.6
CHD4-207ENST00000537634 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 SCLYQ96I15 445 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 RMDN3Q96TC7 470 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 GAS2L1Q99501 681 aaPredicted RBP11.29□□□□□ -0.6
CHD4-207ENST00000537634 JMJD4Q9H9V9 463 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 VAT1LQ9HCJ6 419 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 CXXC1Q9P0U4 656 aaPredicted RBP11.29□□□□□ -0.6
CHD4-207ENST00000537634 TANC1Q9C0D5 1861 aa11.29□□□□□ -0.6
CHD4-207ENST00000537634 LAMA2P24043 3122 aaKnown RBP11.28□□□□□ -0.6
CHD4-207ENST00000537634 ZBBXA8MT70 800 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 ARIH2O95376 493 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 GH1P01241 217 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 PFKMP08237 780 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 GSPT1P15170 499 aaKnown RBP11.28□□□□□ -0.6
CHD4-207ENST00000537634 CHMP4BP1P59074 171 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 STXBP2Q15833 593 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 ARHGEF16Q5VV41 709 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 TBC1D5Q92609 795 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 TAAR1Q96RJ0 339 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 IWS1Q96ST2 819 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 AMNQ9BXJ7 453 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 IL25Q9H293 177 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 COL20A1Q9P218 1284 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 NOD1Q9Y239 953 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 SUPT16HQ9Y5B9 1047 aaKnown RBP11.28□□□□□ -0.6
CHD4-207ENST00000537634 SLC4A7Q9Y6M7 1214 aa11.28□□□□□ -0.6
CHD4-207ENST00000537634 SCN5AQ14524 2016 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 KLRF2D3W0D1 207 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 CFBP00751 764 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 EIF2AK2P19525 551 aaKnown RBP11.27□□□□□ -0.61
CHD4-207ENST00000537634 PDE4AP27815 886 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 PTPN11Q06124 597 aaPredicted RBP11.27□□□□□ -0.61
CHD4-207ENST00000537634 SEC23AQ15436 765 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 LY6KQ17RY6 165 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 CCDC62Q6P9F0 684 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 CHST3Q7LGC8 479 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 DEFB128Q7Z7B8 93 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 RALYLQ86SE5 291 aaKnown RBP11.27□□□□□ -0.61
CHD4-207ENST00000537634 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 RETREG2Q8NC44 543 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 PPP1R13LQ8WUF5 828 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 AFG1LQ8WV93 481 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 NKX2-4Q9H2Z4 354 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 PRDM12Q9H4Q4 367 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 SLC28A3Q9HAS3 691 aa11.27□□□□□ -0.61
CHD4-207ENST00000537634 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
CHD4-207ENST00000537634 ERICH2A1L162 156 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 ZBTB5O15062 677 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 MMP3P08254 477 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 ACTN1P12814 892 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 ATP2A2P16615 1042 aaKnown RBP11.26□□□□□ -0.61
CHD4-207ENST00000537634 RFC2P35250 354 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 ARHGAP1Q07960 439 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 BFSP2Q13515 415 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 SART3Q15020 963 aaKnown RBP11.26□□□□□ -0.61
CHD4-207ENST00000537634 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 RNF216Q9NWF9 866 aaPredicted RBP11.26□□□□□ -0.61
CHD4-207ENST00000537634 MAD2L2Q9UI95 211 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 YBX2Q9Y2T7 364 aaKnown RBP11.26□□□□□ -0.61
CHD4-207ENST00000537634 MRVI1Q9Y6F6 885 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 MYO9BQ13459 2157 aa11.26□□□□□ -0.61
CHD4-207ENST00000537634 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
CHD4-207ENST00000537634 IFIT3O14879 490 aaKnown RBP11.25□□□□□ -0.61
CHD4-207ENST00000537634 EIF3JO75822 258 aaKnown RBP11.25□□□□□ -0.61
CHD4-207ENST00000537634 NR3C2P08235 984 aa11.25□□□□□ -0.61
CHD4-207ENST00000537634 CYP21A2P08686 494 aa11.25□□□□□ -0.61
CHD4-207ENST00000537634 CASTP20810 708 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms