RNA–Protein interactions for RNA: ENST00000536582.5

PAAF1-208, Transcript of proteasomal ATPase associated factor 1, human

TSL 2

Gene PAAF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAAF1-208	ENST00000536582	RASGRP4	Q8TDF6	673 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	CLEC4D	Q8WXI8	215 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	DDX12P	Q92771	950 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	PSTPIP2	Q9H939	334 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	EFCC1	Q9HA90	598 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	TMEM260	Q9NX78	707 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	MORF4L1	Q9UBU8	362 aa		11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	BIN2	Q9UBW5	565 aa	Predicted RBP	11.11	□□□□□ -0.63
PAAF1-208	ENST00000536582	TULP1	O00294	542 aa	Predicted RBP	11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	OPLAH	O14841	1288 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	STX6	O43752	255 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	BCR	P11274	1271 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	PDC	P20941	246 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	CALML3	P27482	149 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	CCNA1	P78396	465 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	TRAF1	Q13077	416 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	JAKMIP3	Q5VZ66	844 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	FERMT3	Q86UX7	667 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	FCHSD1	Q86WN1	690 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	CCDC148	Q8NFR7	591 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	FBXO18	Q8NFZ0	1043 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	PGBD1	Q96JS3	809 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	PURB	Q96QR8	312 aa	Known RBP	11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	PHF20	Q9BVI0	1012 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	C6orf50	Q9HD87	102 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	SH3GLB2	Q9NR46	395 aa		11.1	□□□□□ -0.63
PAAF1-208	ENST00000536582	THSD7B	Q9C0I4	1608 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	BTBD18	B2RXH4	712 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	hCG_1984214	I3L0E3	225 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	SLC25A27	O95847	323 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	MMP1	P03956	469 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	KRT2	P35908	639 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	MRPL12	P52815	198 aa	Known RBP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	NR5A1	Q13285	461 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	GNL2	Q13823	731 aa	Known RBP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	BAAT	Q14032	418 aa	Predicted RBP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	SAFB	Q15424	915 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	FAM110C	Q1W6H9	321 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	TKFC	Q3LXA3	575 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	NOM1	Q5C9Z4	860 aa	Known RBP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	PPP1R18	Q6NYC8	613 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	SLC30A10	Q6XR72	485 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	DIS3L2	Q8IYB7	885 aa	Known RBP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	BLID	Q8IZY5	108 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	ANKRD35	Q8N283	1001 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	ZNF713	Q8N859	430 aa	Predicted RBP	11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	CHST13	Q8NET6	341 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	CUL5	Q93034	780 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	ZBED2	Q9BTP6	218 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	BEGAIN	Q9BUH8	593 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	ZMYND12	Q9H0C1	365 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	ACAD9	Q9H845	621 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	RIC8A	Q9NPQ8	531 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	PNMA2	Q9UL42	364 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	PCDHA4	Q9UN74	947 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	MTMR6	Q9Y217	621 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	ZSWIM8	A7E2V4	1837 aa		11.09	□□□□□ -0.63
PAAF1-208	ENST00000536582	PLXNB2	O15031	1838 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	KIF28P	B7ZC32	967 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	PGK2	P07205	417 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	POLR2M	P0CAP2	368 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	GNA11	P29992	359 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	MAP2K1	Q02750	393 aa	Predicted RBP	11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	NPY5R	Q15761	445 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	RNF207	Q6ZRF8	634 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	MCF2L2	Q86YR7	1114 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	MMP19	Q99542	508 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	ARHGAP39	Q9C0H5	1083 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	MROH8	Q9H579	483 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	BRMS1	Q9HCU9	246 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	A1CF	Q9NQ94	594 aa	Known RBP	11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	DOCK3	Q8IZD9	2030 aa		11.08	□□□□□ -0.64
PAAF1-208	ENST00000536582	MGAM	O43451	1857 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	ESYT2	A0FGR8	921 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	PPP1R3G	B7ZBB8	358 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	MEIS2	O14770	477 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	FCER1A	P12319	257 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	ATP2B1	P20020	1258 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	CTGF	P29279	349 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	RPS6	P62753	249 aa	Known RBP	11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	UBXN2A	P68543	259 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	CNTN2	Q02246	1040 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	KCTD2	Q14681	263 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	EARS2	Q5JPH6	523 aa	Known RBP	11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	GPR142	Q7Z601	462 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	PLEKHH3	Q7Z736	793 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	REXO1	Q8N1G1	1221 aa	Known RBP	11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	SHCBP1	Q8NEM2	672 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	BICD2	Q8TD16	824 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	TAAR1	Q96RJ0	339 aa		11.07	□□□□□ -0.64
PAAF1-208	ENST00000536582	CYP39A1	Q9NYL5	469 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms