RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 UMODL1Q5DID0 1318 aa13.07□□□□□ -0.32
LMO3-214ENST00000536509 PTPDC1A2A3K4 754 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 ATP2A2P16615 1042 aaKnown RBP13.06□□□□□ -0.32
LMO3-214ENST00000536509 SNAP25P60880 206 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 PSMC6P62333 389 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 PTPN11Q06124 597 aaPredicted RBP13.06□□□□□ -0.32
LMO3-214ENST00000536509 AAK1Q2M2I8 961 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 NFRKBQ6P4R8 1299 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 RNF207Q6ZRF8 634 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 SCFD2Q8WU76 684 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 PPM1EQ8WY54 764 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 YBX2Q9Y2T7 364 aaKnown RBP13.06□□□□□ -0.32
LMO3-214ENST00000536509 TTC28Q96AY4 2481 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 SPTBN5Q9NRC6 3674 aaKnown RBP13.06□□□□□ -0.32
LMO3-214ENST00000536509 TNKSO95271 1327 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 WDR19Q8NEZ3 1342 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 SALL3Q9BXA9 1300 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 TANC1Q9C0D5 1861 aa13.06□□□□□ -0.32
LMO3-214ENST00000536509 ZBBXA8MT70 800 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 NFIBO00712 420 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 PDE4DQ08499 809 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 ADGRE1Q14246 886 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 PPP2R5BQ15173 497 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 OR6J1Q8NGC5 347 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 PHOSPHO2Q8TCD6 241 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 OTUD7AQ8TE49 926 aaPredicted RBP13.05□□□□□ -0.32
LMO3-214ENST00000536509 CHMP4CQ96CF2 233 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 TMEM47Q9BQJ4 181 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 MTMR7Q9Y216 660 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 PCDHB15Q9Y5E8 787 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
LMO3-214ENST00000536509 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 A6NJR5 290 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 FGAP02671 866 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 MYL3P08590 195 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 PDHBP11177 359 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
LMO3-214ENST00000536509 EDNRBP24530 442 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 SLC16A2P36021 539 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 BFSP2Q13515 415 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
LMO3-214ENST00000536509 VPS53Q5VIR6 699 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 TTBK2Q6IQ55 1244 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 SLC9A7Q96T83 725 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 INCENPQ9NQS7 918 aa13.04□□□□□ -0.32
LMO3-214ENST00000536509 TRMT13Q9NUP7 481 aaKnown RBP13.04□□□□□ -0.32
LMO3-214ENST00000536509 MYH6P13533 1939 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 KIAA1217Q5T5P2 1943 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 CALML3P27482 149 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 MFAP1P55081 439 aaKnown RBP13.03□□□□□ -0.32
LMO3-214ENST00000536509 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
LMO3-214ENST00000536509 ZNF543Q08ER8 600 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 TTLL4Q14679 1199 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 CCDC85BQ15834 202 aaPredicted RBP13.03□□□□□ -0.32
LMO3-214ENST00000536509 CCDC178Q5BJE1 867 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
LMO3-214ENST00000536509 MFSD6Q6ZSS7 791 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 RASGRP2Q7LDG7 609 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 CCDC155Q8N6L0 562 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 CLEC4DQ8WXI8 215 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 SCLYQ96I15 445 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 PURBQ96QR8 312 aaKnown RBP13.03□□□□□ -0.32
LMO3-214ENST00000536509 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
LMO3-214ENST00000536509 GPCPD1Q9NPB8 672 aa13.03□□□□□ -0.32
LMO3-214ENST00000536509 DDX49Q9Y6V7 483 aaKnown RBP13.03□□□□□ -0.32
LMO3-214ENST00000536509 TRIP12Q14669 1992 aaPredicted RBP13.03□□□□□ -0.32
LMO3-214ENST00000536509 KIF28PB7ZC32 967 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.33
LMO3-214ENST00000536509 BAIAP3O94812 1187 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
LMO3-214ENST00000536509 SNHG28P0DPA3 235 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 TXNP10599 105 aaKnown RBP13.02□□□□□ -0.33
LMO3-214ENST00000536509 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
LMO3-214ENST00000536509 CYP2C9P11712 490 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 PTGS1P23219 599 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 RABGGTBP53611 331 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 PDE1AP54750 535 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 NBPF20Q3BBV1 942 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 FAM47CQ5HY64 1035 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 TMEM63BQ5T3F8 832 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 ANKRD45Q5TZF3 282 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 SLC30A10Q6XR72 485 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 VWCEQ96DN2 955 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 UHRF1Q96T88 793 aaPredicted RBP13.02□□□□□ -0.33
LMO3-214ENST00000536509 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
LMO3-214ENST00000536509 FRMPD2Q68DX3 1309 aaPredicted RBP13.02□□□□□ -0.33
LMO3-214ENST00000536509 MUC3AQ02505 3323 aa13.02□□□□□ -0.33
LMO3-214ENST00000536509 NCOR1O75376 2440 aa13.01□□□□□ -0.33
LMO3-214ENST00000536509 CHD7Q9P2D1 2997 aa13.01□□□□□ -0.33
LMO3-214ENST00000536509 IQCF3P0C7M6 154 aa13.01□□□□□ -0.33
LMO3-214ENST00000536509 PDE4AP27815 886 aa13.01□□□□□ -0.33
LMO3-214ENST00000536509 DEFB128Q7Z7B8 93 aa13.01□□□□□ -0.33
LMO3-214ENST00000536509 DGKHQ86XP1 1220 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms