RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 TMEM240Q5SV17 173 aa15.29■□□□□ 0.04
RTN3-207ENST00000536011 RALYLQ86SE5 291 aaKnown RBP15.29■□□□□ 0.04
RTN3-207ENST00000536011 IWS1Q96ST2 819 aa15.29■□□□□ 0.04
RTN3-207ENST00000536011 CDX2Q99626 313 aaPredicted RBP15.29■□□□□ 0.04
RTN3-207ENST00000536011 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
RTN3-207ENST00000536011 ALDH8A1Q9H2A2 487 aaPredicted RBP15.29■□□□□ 0.04
RTN3-207ENST00000536011 CPVLQ9H3G5 476 aa15.29■□□□□ 0.04
RTN3-207ENST00000536011 IL23AQ9NPF7 189 aa15.29■□□□□ 0.04
RTN3-207ENST00000536011 EYSQ5T1H1 3165 aa15.29■□□□□ 0.04
RTN3-207ENST00000536011 GRIN2DO15399 1336 aa15.28■□□□□ 0.04
RTN3-207ENST00000536011 A6NJR5 290 aa15.28■□□□□ 0.04
RTN3-207ENST00000536011 B4GALT4O60513 344 aa15.28■□□□□ 0.04
RTN3-207ENST00000536011 PSMC6P62333 389 aa15.28■□□□□ 0.04
RTN3-207ENST00000536011 STXBP2Q15833 593 aa15.28■□□□□ 0.04
RTN3-207ENST00000536011 RPUSD2Q8IZ73 545 aaKnown RBP15.28■□□□□ 0.04
RTN3-207ENST00000536011 NOC4LQ9BVI4 516 aaKnown RBP15.28■□□□□ 0.04
RTN3-207ENST00000536011 TRPV6Q9H1D0 765 aa15.28■□□□□ 0.04
RTN3-207ENST00000536011 JMJD4Q9H9V9 463 aa15.28■□□□□ 0.04
RTN3-207ENST00000536011 KLRF2D3W0D1 207 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 DLL1O00548 723 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 FOSL2P15408 326 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 PTGS1P23219 599 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 CHMLP26374 656 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 PTPN11Q06124 597 aaPredicted RBP15.27■□□□□ 0.04
RTN3-207ENST00000536011 TMEM63BQ5T3F8 832 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 NFRKBQ6P4R8 1299 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 ZNF365Q70YC5 407 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 SYTL5Q8TDW5 730 aaPredicted RBP15.27■□□□□ 0.04
RTN3-207ENST00000536011 TIFAQ96CG3 184 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 RMDN3Q96TC7 470 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 TTYH1Q9H313 450 aaPredicted RBP15.27■□□□□ 0.04
RTN3-207ENST00000536011 VAT1LQ9HCJ6 419 aa15.27■□□□□ 0.04
RTN3-207ENST00000536011 MAP3K20Q9NYL2 800 aaKnown RBP15.27■□□□□ 0.04
RTN3-207ENST00000536011 CUL9Q8IWT3 2517 aa15.27■□□□□ 0.03
RTN3-207ENST00000536011 MYH6P13533 1939 aa15.27■□□□□ 0.03
RTN3-207ENST00000536011 FGBP02675 491 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 PFKMP08237 780 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 SEC23AQ15436 765 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 RAB30Q15771 203 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 FAM47CQ5HY64 1035 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 RASIP1Q5U651 963 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 ARHGEF16Q5VV41 709 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 C16orf59Q7L2K0 433 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.26■□□□□ 0.03
RTN3-207ENST00000536011 SAMD3Q8N6K7 520 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 MAFAQ8NHW3 353 aaPredicted RBP15.26■□□□□ 0.03
RTN3-207ENST00000536011 NCOA7Q8NI08 942 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 HERVK_113Q902F9 699 aa15.26■□□□□ 0.03
RTN3-207ENST00000536011 IFIT3O14879 490 aaKnown RBP15.25■□□□□ 0.03
RTN3-207ENST00000536011 ZBTB5O15062 677 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 EIF3JO75822 258 aaKnown RBP15.25■□□□□ 0.03
RTN3-207ENST00000536011 CFBP00751 764 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 GH1P01241 217 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 CYP21A2P08686 494 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 ACRP10323 421 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 CCL23P55773 120 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 MYLIPQ8WY64 445 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 IL25Q9H293 177 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 ZNF576Q9H609 170 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 MSRAQ9UJ68 235 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 NOD1Q9Y239 953 aa15.25■□□□□ 0.03
RTN3-207ENST00000536011 SCN10AQ9Y5Y9 1956 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
RTN3-207ENST00000536011 SGSM2O43147 1006 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 RFC2P35250 354 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 HSD17B4P51659 736 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 GHRHRQ02643 423 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 WTAPQ15007 396 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 NBPF20Q3BBV1 942 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 CCDC62Q6P9F0 684 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 SEPT14Q6ZU15 432 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 CYB5R4Q7L1T6 521 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 CATIPQ7Z7H3 387 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 CCDC155Q8N6L0 562 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 TAAR1Q96RJ0 339 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 PXMP2Q9NR77 195 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 TRMT13Q9NUP7 481 aaKnown RBP15.24■□□□□ 0.03
RTN3-207ENST00000536011 MAD2L2Q9UI95 211 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 PCDHA1Q9Y5I3 950 aa15.24■□□□□ 0.03
RTN3-207ENST00000536011 PRUNE2Q8WUY3 3088 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 UMODL1Q5DID0 1318 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 E7EWF7 191 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 EIF2AK2P19525 551 aaKnown RBP15.23■□□□□ 0.03
RTN3-207ENST00000536011 CASTP20810 708 aaKnown RBP15.23■□□□□ 0.03
RTN3-207ENST00000536011 PTH1RQ03431 593 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 BFSP2Q13515 415 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 GRM4Q14833 912 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 KCNV1Q6PIU1 500 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 STAG2Q8N3U4 1231 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 RETREG2Q8NC44 543 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 TBC1D5Q92609 795 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 COPS5Q92905 334 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 EMID1Q96A84 441 aaPredicted RBP15.23■□□□□ 0.03
RTN3-207ENST00000536011 MTMR8Q96EF0 704 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 PBX4Q9BYU1 374 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 WNT8AQ9H1J5 351 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 COL20A1Q9P218 1284 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 MRVI1Q9Y6F6 885 aa15.23■□□□□ 0.03
RTN3-207ENST00000536011 SLC4A7Q9Y6M7 1214 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms