RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 RTP1P59025 263 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-205ENST00000535900 KCTD2Q14681 263 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 TMEM132BQ14DG7 1078 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 SLC35G1Q2M3R5 365 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 GJC2Q5T442 439 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-205ENST00000535900 KRT40Q6A162 431 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 ATL3Q6DD88 541 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 MCTP2Q6DN12 878 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 TTBK2Q6IQ55 1244 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 BRAPQ7Z569 592 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 ARRDC4Q8NCT1 418 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 MAML3Q96JK9 1138 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 PIGSQ96S52 555 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 NUP88Q99567 741 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-205ENST00000535900 LBHD1Q9BQE6 289 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-205ENST00000535900 AMNQ9BXJ7 453 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
UBE3B-205ENST00000535900 FOXP1Q9H334 677 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-205ENST00000535900 ATP11BQ9Y2G3 1177 aa12.37□□□□□ -0.43
UBE3B-205ENST00000535900 VPS37CA5D8V6 355 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-205ENST00000535900 MMP1P03956 469 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 SLC16A2P36021 539 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 CDC37Q16543 378 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-205ENST00000535900 RIOX2Q8IUF8 465 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 SAMD3Q8N6K7 520 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 DAGLBQ8NCG7 672 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 TNPO1Q92973 898 aaKnown RBP12.36□□□□□ -0.43
UBE3B-205ENST00000535900 PHF20Q9BVI0 1012 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 ZMYND12Q9H0C1 365 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 VAT1LQ9HCJ6 419 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 C6orf50Q9HD87 102 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 ADAMTS5Q9UNA0 930 aa12.36□□□□□ -0.43
UBE3B-205ENST00000535900 DDX11L8A8MPP1 907 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 STXBP3O00186 592 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 VWA5AO00534 786 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 ATP2A1O14983 1001 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 ZBED4O75132 1171 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 F13A1P00488 732 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 PGK2P07205 417 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.434e-7■■■□□ 17.3
UBE3B-205ENST00000535900 NAPAP54920 295 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 NFKBIBQ15653 356 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 QRICH1Q2TAL8 776 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 LRIT3Q3SXY7 679 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 WWC2Q6AWC2 1192 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 RASGRP2Q7LDG7 609 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 HEATR3Q7Z4Q2 680 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 FBXO11Q86XK2 927 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 HOMER1Q86YM7 354 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 KIFC2Q96AC6 838 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 SLC38A10Q9HBR0 1119 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 PRDM5Q9NQX1 630 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-205ENST00000535900 ZDHHC9Q9Y397 364 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 CTDP1Q9Y5B0 961 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-205ENST00000535900 LAMA3Q16787 3333 aa12.35□□□□□ -0.43
UBE3B-205ENST00000535900 GOLGA6L22H0YM25 854 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 IGHA2P01877 340 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 ICAM1P05362 532 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 KRT2P35908 639 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 STAT3P40763 770 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 MRPL12P52815 198 aaKnown RBP12.34□□□□□ -0.43
UBE3B-205ENST00000535900 NLRP5P59047 1200 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 GNL2Q13823 731 aaKnown RBP12.34□□□□□ -0.43
UBE3B-205ENST00000535900 SNRNP48Q6IEG0 339 aaKnown RBP12.34□□□□□ -0.43
UBE3B-205ENST00000535900 AIFM3Q96NN9 605 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 TEX13BQ9BXU2 312 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 CPVLQ9H3G5 476 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 MAP3K20Q9NYL2 800 aaKnown RBP12.34□□□□□ -0.43
UBE3B-205ENST00000535900 VPS54Q9P1Q0 977 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 ZNF214Q9UL59 606 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-205ENST00000535900 MRPL11Q9Y3B7 192 aaKnown RBP12.34□□□□□ -0.43
UBE3B-205ENST00000535900 PCDHA1Q9Y5I3 950 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 ABCB11O95342 1321 aa12.34□□□□□ -0.43
UBE3B-205ENST00000535900 ZNFX1Q9P2E3 1918 aaKnown RBP12.33□□□□□ -0.44
UBE3B-205ENST00000535900 PPFIA3O75145 1194 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 RARBP10826 455 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 MCM4P33991 863 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 PKP1Q13835 747 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 TKFCQ3LXA3 575 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 PRAMEF19Q5SWL8 479 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 MCTP1Q6DN14 999 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 GPR153Q6NV75 609 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 Q7L0L9 218 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 DIS3L2Q8IYB7 885 aaKnown RBP12.33□□□□□ -0.44
UBE3B-205ENST00000535900 DEFB123Q8N688 67 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 CUL5Q93034 780 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 RIC8AQ9NPQ8 531 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 XPNPEP3Q9NQH7 507 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 NRBP1Q9UHY1 535 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 PCDHA4Q9UN74 947 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 CNPY2Q9Y2B0 182 aa12.33□□□□□ -0.44
UBE3B-205ENST00000535900 hCG_1642624A0A1W2PR95 340 aa12.32□□□□□ -0.44
UBE3B-205ENST00000535900 SMCO2A6NFE2 343 aa12.32□□□□□ -0.44
UBE3B-205ENST00000535900 ADCYAP1R1P41586 468 aa12.32□□□□□ -0.44
UBE3B-205ENST00000535900 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
UBE3B-205ENST00000535900 ADCY7P51828 1080 aa12.32□□□□□ -0.44
UBE3B-205ENST00000535900 RESTQ13127 1097 aa12.32□□□□□ -0.44
UBE3B-205ENST00000535900 LRRC41Q15345 812 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms