RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 PPP1R13LQ8WUF5 828 aa24.1■■□□□ 1.45
LTBR-205ENST00000535739 ZSCAN10Q96SZ4 725 aaPredicted RBP24.1■■□□□ 1.45
LTBR-205ENST00000535739 DSCC1Q9BVC3 393 aa24.1■■□□□ 1.45
LTBR-205ENST00000535739 MTIF3Q9H2K0 278 aaKnown RBP24.1■■□□□ 1.45
LTBR-205ENST00000535739 ZSWIM5Q9P217 1185 aa24.1■■□□□ 1.45
LTBR-205ENST00000535739 KIAA1217Q5T5P2 1943 aa24.1■■□□□ 1.45
LTBR-205ENST00000535739 TNKSO95271 1327 aa24.1■■□□□ 1.45
LTBR-205ENST00000535739 NKRFO15226 690 aaKnown RBP eCLIP24.09■■□□□ 1.45
LTBR-205ENST00000535739 ARIH2O95376 493 aa24.09■■□□□ 1.45
LTBR-205ENST00000535739 TXNP10599 105 aaKnown RBP24.09■■□□□ 1.45
LTBR-205ENST00000535739 NT5C2P49902 561 aa24.09■■□□□ 1.45
LTBR-205ENST00000535739 NBPF20Q3BBV1 942 aa24.09■■□□□ 1.45
LTBR-205ENST00000535739 VWCEQ96DN2 955 aa24.09■■□□□ 1.45
LTBR-205ENST00000535739 PRDM12Q9H4Q4 367 aa24.09■■□□□ 1.45
LTBR-205ENST00000535739 MSRAQ9UJ68 235 aa24.09■■□□□ 1.45
LTBR-205ENST00000535739 TRIP12Q14669 1992 aaPredicted RBP24.09■■□□□ 1.45
LTBR-205ENST00000535739 B4DLN1 442 aa24.08■■□□□ 1.45
LTBR-205ENST00000535739 SUPT20HL2P0C7V6 817 aa24.08■■□□□ 1.45
LTBR-205ENST00000535739 MRPL12P52815 198 aaKnown RBP24.08■■□□□ 1.45
LTBR-205ENST00000535739 RAB30Q15771 203 aa24.08■■□□□ 1.45
LTBR-205ENST00000535739 IMMTQ16891 758 aaKnown RBP24.08■■□□□ 1.45
LTBR-205ENST00000535739 BRDTQ58F21 947 aaPredicted RBP24.08■■□□□ 1.45
LTBR-205ENST00000535739 FAM47CQ5HY64 1035 aa24.08■■□□□ 1.45
LTBR-205ENST00000535739 RPUSD2Q8IZ73 545 aaKnown RBP24.08■■□□□ 1.45
LTBR-205ENST00000535739 ABCB11O95342 1321 aa24.08■■□□□ 1.44
LTBR-205ENST00000535739 RAD50Q92878 1312 aa24.08■■□□□ 1.44
LTBR-205ENST00000535739 TTC28Q96AY4 2481 aa24.07■■□□□ 1.44
LTBR-205ENST00000535739 A6NJR5 290 aa24.07■■□□□ 1.44
LTBR-205ENST00000535739 QRICH1Q2TAL8 776 aa24.07■■□□□ 1.44
LTBR-205ENST00000535739 ASPRV1Q53RT3 343 aa24.07■■□□□ 1.44
LTBR-205ENST00000535739 TAAR1Q96RJ0 339 aa24.07■■□□□ 1.44
LTBR-205ENST00000535739 GAS2L1Q99501 681 aaPredicted RBP24.07■■□□□ 1.44
LTBR-205ENST00000535739 IL25Q9H293 177 aa24.07■■□□□ 1.44
LTBR-205ENST00000535739 NKX2-4Q9H2Z4 354 aa24.07■■□□□ 1.44
LTBR-205ENST00000535739 COL20A1Q9P218 1284 aa24.07■■□□□ 1.44
LTBR-205ENST00000535739 YBX2Q9Y2T7 364 aaKnown RBP24.07■■□□□ 1.44
LTBR-205ENST00000535739 TTLL4Q14679 1199 aa24.06■■□□□ 1.44
LTBR-205ENST00000535739 SYTL5Q8TDW5 730 aaPredicted RBP24.06■■□□□ 1.44
LTBR-205ENST00000535739 KRT23Q9C075 422 aa24.06■■□□□ 1.44
LTBR-205ENST00000535739 VAT1LQ9HCJ6 419 aa24.06■■□□□ 1.44
LTBR-205ENST00000535739 CTNNA3Q9UI47 895 aa24.06■■□□□ 1.44
LTBR-205ENST00000535739 MYH7BA7E2Y1 1941 aa24.06■■□□□ 1.44
LTBR-205ENST00000535739 DHX16O60231 1041 aaKnown RBP24.05■■□□□ 1.44
LTBR-205ENST00000535739 KPNA6O60684 536 aa24.05■■□□□ 1.44
LTBR-205ENST00000535739 PARP1P09874 1014 aaKnown RBP24.05■■□□□ 1.44
LTBR-205ENST00000535739 RABGGTBP53611 331 aa24.05■■□□□ 1.44
LTBR-205ENST00000535739 JMJD4Q9H9V9 463 aa24.05■■□□□ 1.44
LTBR-205ENST00000535739 SLC4A7Q9Y6M7 1214 aa24.05■■□□□ 1.44
LTBR-205ENST00000535739 TET1Q8NFU7 2136 aa24.05■■□□□ 1.44
LTBR-205ENST00000535739 REV3LO60673 3130 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 BAZ2BQ9UIF8 2168 aaKnown RBP24.04■■□□□ 1.44
LTBR-205ENST00000535739 ZBBXA8MT70 800 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 NFRKBQ6P4R8 1299 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 CCDC62Q6P9F0 684 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 SEPT14Q6ZU15 432 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 DEFB128Q7Z7B8 93 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 FBXO11Q86XK2 927 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 NSUN6Q8TEA1 469 aaKnown RBP24.04■■□□□ 1.44
LTBR-205ENST00000535739 PPM1EQ8WY54 764 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 UBAC1Q9BSL1 405 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 MAF1Q9H063 256 aa24.04■■□□□ 1.44
LTBR-205ENST00000535739 TANC1Q9C0D5 1861 aa24.03■■□□□ 1.44
LTBR-205ENST00000535739 CHMP4BP1P59074 171 aa24.03■■□□□ 1.44
LTBR-205ENST00000535739 LY6KQ17RY6 165 aa24.03■■□□□ 1.44
LTBR-205ENST00000535739 MCF2L2Q86YR7 1114 aa24.03■■□□□ 1.44
LTBR-205ENST00000535739 STAG2Q8N3U4 1231 aa24.03■■□□□ 1.44
LTBR-205ENST00000535739 RMDN3Q96TC7 470 aa24.03■■□□□ 1.44
LTBR-205ENST00000535739 CNNM2Q9H8M5 875 aa24.03■■□□□ 1.44
LTBR-205ENST00000535739 SLC28A3Q9HAS3 691 aa24.03■■□□□ 1.44
LTBR-205ENST00000535739 PRDM6Q9NQX0 595 aa24.03■■□□□ 1.44
LTBR-205ENST00000535739 MRPL11Q9Y3B7 192 aaKnown RBP24.03■■□□□ 1.44
LTBR-205ENST00000535739 MYOGP15173 224 aa24.02■■□□□ 1.44
LTBR-205ENST00000535739 ADGRE1Q14246 886 aa24.02■■□□□ 1.44
LTBR-205ENST00000535739 IFIT1BQ5T764 474 aaKnown RBP24.02■■□□□ 1.44
LTBR-205ENST00000535739 AFG1LQ8WV93 481 aa24.02■■□□□ 1.44
LTBR-205ENST00000535739 TRANK1O15050 2925 aa24.01■■□□□ 1.43
LTBR-205ENST00000535739 PFKMP08237 780 aa24.01■■□□□ 1.43
LTBR-205ENST00000535739 PDE4AP27815 886 aa24.01■■□□□ 1.43
LTBR-205ENST00000535739 PTPN11Q06124 597 aaPredicted RBP24.01■■□□□ 1.43
LTBR-205ENST00000535739 STXBP2Q15833 593 aa24.01■■□□□ 1.43
LTBR-205ENST00000535739 CYB5R4Q7L1T6 521 aa24.01■■□□□ 1.43
LTBR-205ENST00000535739 CHST3Q7LGC8 479 aa24.01■■□□□ 1.43
LTBR-205ENST00000535739 IWS1Q96ST2 819 aa24.01■■□□□ 1.43
LTBR-205ENST00000535739 CFBP00751 764 aa24■■□□□ 1.43
LTBR-205ENST00000535739 GH1P01241 217 aa24■■□□□ 1.43
LTBR-205ENST00000535739 MMP3P08254 477 aa24■■□□□ 1.43
LTBR-205ENST00000535739 GSPT1P15170 499 aaKnown RBP24■■□□□ 1.43
LTBR-205ENST00000535739 ATP2A2P16615 1042 aaKnown RBP24■■□□□ 1.43
LTBR-205ENST00000535739 EIF2AK2P19525 551 aaKnown RBP24■■□□□ 1.43
LTBR-205ENST00000535739 IGFBP4P22692 258 aa24■■□□□ 1.43
LTBR-205ENST00000535739 ARHGAP1Q07960 439 aa24■■□□□ 1.43
LTBR-205ENST00000535739 SEC23AQ15436 765 aa24■■□□□ 1.43
LTBR-205ENST00000535739 ARHGEF16Q5VV41 709 aa24■■□□□ 1.43
LTBR-205ENST00000535739 OPLAHO14841 1288 aa23.99■■□□□ 1.43
LTBR-205ENST00000535739 IQCF3P0C7M6 154 aa23.99■■□□□ 1.43
LTBR-205ENST00000535739 RETREG2Q8NC44 543 aa23.99■■□□□ 1.43
LTBR-205ENST00000535739 NOD1Q9Y239 953 aa23.99■■□□□ 1.43
LTBR-205ENST00000535739 PCDHA11Q9Y5I1 949 aa23.99■■□□□ 1.43
LTBR-205ENST00000535739 MUC3AQ02505 3323 aa23.99■■□□□ 1.43
LTBR-205ENST00000535739 KLRF2D3W0D1 207 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms